Gene Rpic_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3530 
Symbol 
ID6289589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3700377 
End bp3700928 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content66% 
IMG OID642627114 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001901081 
Protein GI187930594 
COG category[R] General function prediction only 
COG ID[COG4341] Predicted HD phosphohydrolase 
TIGRFAM ID[TIGR03276] phosphonate degradation operons associated HDIG domain protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0136008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGA GTCTTGACGA CATCCGCACG CTGTTCGATC GCCACGGCAG CATTGCCTAC 
AGTGGCGAGC CCGTCACCCA ACTCGAACAT GCGTTGCAGA CGGCGGCGCT GGCGGAGGCG
GCCGGCGCGT CGGATGCGCT GATCACGGCG GCGTTGCTGC ACGACCTCGG TCATTTGCTG
AACCTGCAAG GTGAGACCCC CACCGCGCAC GGCATCGACG ATCAGCACCA GTACGTTGCG
CTGCCATTTC TGCGCGCCAC GTTTCCGGAC GCCGTGCTGG AGCCGATCCG CCTGCACGTG
GATGCCAAGC GCTGCCTGTG CGCGATGGAC GCGCATTACT ACGCACGCCT ATCAGCGGAT
TCGGTACGCA GCCTGGCGCT GCAGGGCGGC GTGTTTTCGA CACACGAGGC CGAGGCCTTC
ATGCAGCGTC CATACGCTGC CGATGCGCTG CAATTGCGCC AGTGGGATGA CCTCGCCAAG
GTGGCGGGGC AGCGCACGCC TGACCTTGCG CACTTCCTGG CGATGGCCGC GCGGGTTTCA
GCGGCAGCCT AG
 
Protein sequence
MALSLDDIRT LFDRHGSIAY SGEPVTQLEH ALQTAALAEA AGASDALITA ALLHDLGHLL 
NLQGETPTAH GIDDQHQYVA LPFLRATFPD AVLEPIRLHV DAKRCLCAMD AHYYARLSAD
SVRSLALQGG VFSTHEAEAF MQRPYAADAL QLRQWDDLAK VAGQRTPDLA HFLAMAARVS
AAA