| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3529 |
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| Symbol | |
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| ID | 6289588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3699435 |
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| End bp | 3700391 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642627113 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001901080 |
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| Protein GI | 187930593 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.016337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGG TAAAACGCAT CGCATTGGTA CTGGGCGCCA CTGGCGGCAT TGGCGGCGAA
GTGGCACGTC GGCTGGTGGC ACGTGGCTGG CATGTGCGGG CGCTGCAGCG CAATCCGGTC
GCGCTGACGA ACCGCAACAC CGCATTCGAG TGGATTCGCG GCGACGCGAT GGTGCGCGAA
GACGTGGTCG GCGCGGCGCA AGGCGCGGAG CTGATCATCC ACGCCGTCAA CCCGCCGGGC
TACCAGAACT GGGCCGGCCT GGTGCTGCCG ATGATCGACA ACACCATCGC CGCCGCCCGC
GCCTCGGGTG CGCGCATCGT GCTGCCGGGC ACGGTGTACA ACTTCGCGCC GGACACGTTT
CCCGTGCTGC GCGAAACCAC CCCGCAGGCA CCGCTCACGC GCAAGGGCAA GATCCGCGCG
GAGCTGGAGC GCCGCATGCA GGCCGCCAGC GCCGACGGTG TGCGCAGCCT GATCGTGCGC
GCCGGCGATT TCTTCGGGCC GCAAACCAGC AACACCTGGT TTGCCGGCGC GCTGGTCAAG
CCGGGCAAGC CTGTCCGCAC CGTTACGCAT CCGGGCGCCG CCGGCATCGG TCATCAATGG
GCGTATTTGC CCGATGTGGC CGAAACGATG TTGCGTCTTG TCGAGCAAGG CGACCGTCTG
CCGGACTTCG CCGTCTATCA CATGCGCGGC CACTGGGATG CCGATGGCAC GCAGATGGTC
GCATCGATTG GCCGCGCGGT GGGCCACCCC GTCAAGACGC GCGCATTCCC GTGGTGGCTG
ATGCCCGCGC TGACACCGTT CTCGGAGATG CTGCGCGAGA TGCGCGAGAT GCGTTATCTG
TGGCAGCACC CGGTGCGCAT GGACAATGCC AAGCTCGTGC AGGCACTCGG CGCCGAACCG
CACACGCCGT GGGACGAAGC CGTGGGCGCG ACGTTACGCA GTCTAGGCTG CCGCTGA
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| Protein sequence | MEQVKRIALV LGATGGIGGE VARRLVARGW HVRALQRNPV ALTNRNTAFE WIRGDAMVRE
DVVGAAQGAE LIIHAVNPPG YQNWAGLVLP MIDNTIAAAR ASGARIVLPG TVYNFAPDTF
PVLRETTPQA PLTRKGKIRA ELERRMQAAS ADGVRSLIVR AGDFFGPQTS NTWFAGALVK
PGKPVRTVTH PGAAGIGHQW AYLPDVAETM LRLVEQGDRL PDFAVYHMRG HWDADGTQMV
ASIGRAVGHP VKTRAFPWWL MPALTPFSEM LREMREMRYL WQHPVRMDNA KLVQALGAEP
HTPWDEAVGA TLRSLGCR
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