| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3525 |
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| Symbol | |
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| ID | 6286523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3695999 |
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| End bp | 3697147 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642627109 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001901076 |
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| Protein GI | 187930589 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00627098 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGTTT CGCGCGCATC CCGCATTGCA CTCGCCGCGA CGGCACTGTT GGCAGGTACG
GCGTTCGCCC AGGTGAAGGT CGGCATCACG GTGTCTGCCA CGGGGCCGGC CGCTTCCCTA
GGCATTCCGG AAAAGAACAC CGTCGCGCTG CTCCCCAAGG AAATCGCCGG CAAGAAAATC
GAGTACATCG TGCTCGACGA TGCGTCTGAC ACGACCACGG CCGTCAAGAA CACGCGCAAG
TTGATCACCG AAGACAAGGT CGACCTGGTG ATCGGTTCGA CCGTCACGCC GAACTCGCTG
GCGATGGTGG ATGTGGTGGC CGAGAACGAA ACGCCAATGA TCACCTTGGC CGCATCAGCG
CGGATCATCG AGCCGATGGA CGCCAAGCGG GCGTGGGTCT TCAAGACGCC GCAAAACGAT
TCCCACATGG CGACCGCCAT TGCCGAGCAC ATGGCCAACC ACGGCGTGAA GACGGTCGCG
CTGATCGGTT TTGCCGATGC CTATGGCGAT TCGTGGGCGC AGGAGTTCGA CAAGGTGGCT
GCATTGCGCA AGCTGAAGGT CGTCGCCAAT GAGCGCTTTG CTCGGACCGA TACGTCGGTG
ACGGGGCAGG TGCTGAAGAT CATGTCAGCC AATCCGGATG CGGTGCTGAT CGCAGGCTCG
GGTACGCCGG CCGCGTTGCC GGAACGGGCG CTCAAGGAGC GCGGCTACAA GGGCAAGCTG
TATCAGACGC ACGGCGTGGC GAACGCCGAC TTCCTGCGTG TGTGTGGCAA GGACTGCGAA
GGCACGTACC TGCCCGCGGG CCCGATCCTG GTTGCCGAGC AACTGCCGGA CAGCAATCTG
GTAAAGAAGC CGGCGCTGGC GTACAAGACT GCATATGAGA AGGCCTACGG CGGGCAGGTT
TCCACCTTCG GTGGCCACAT GTGGGATGCC GGTTTGTTGT TCACGCAGGC GATGCCCGAA
GCGCTGAAGA AGGGGCAACC CGGCACGCCG GCGTTCCGCA AGGGGCTGCG CGATGCGATG
GAGACGACGA CCAACCTGGC CATCTCGCAC GGCGTGATGA ATATGAATGC GAAGGATCAC
CTCGGGCTGG ATCAGCGGGC GCGGGTGATG GTGGAGATCA AGGACGGGAA GTGGAAGCTG
CAGAATTAA
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| Protein sequence | MKVSRASRIA LAATALLAGT AFAQVKVGIT VSATGPAASL GIPEKNTVAL LPKEIAGKKI
EYIVLDDASD TTTAVKNTRK LITEDKVDLV IGSTVTPNSL AMVDVVAENE TPMITLAASA
RIIEPMDAKR AWVFKTPQND SHMATAIAEH MANHGVKTVA LIGFADAYGD SWAQEFDKVA
ALRKLKVVAN ERFARTDTSV TGQVLKIMSA NPDAVLIAGS GTPAALPERA LKERGYKGKL
YQTHGVANAD FLRVCGKDCE GTYLPAGPIL VAEQLPDSNL VKKPALAYKT AYEKAYGGQV
STFGGHMWDA GLLFTQAMPE ALKKGQPGTP AFRKGLRDAM ETTTNLAISH GVMNMNAKDH
LGLDQRARVM VEIKDGKWKL QN
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