Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3519 |
Symbol | |
ID | 6288674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3689970 |
End bp | 3690518 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642627104 |
Product | hypothetical protein |
Protein accession | YP_001901071 |
Protein GI | 187930584 |
COG category | [C] Energy production and conversion |
COG ID | [COG3312] F0F1-type ATP synthase, subunit I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.32738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0000213039 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAGCCAA CCGACCGGCA ACGGCCCGAT TCTTACGCTT CGTTGAAAGC CGCCCGACCC ACGTCGGCGC AGGATCCGAA GCGCGACGGT TGGGACGATG AGGAGCAGGC GGAGCCGCCG GTGCATGTGC TCTCGCATGA CGAAGCGGTC GCCCTGTTCG GCGAGCAGGC TCTGCAGGCC TCGCGTATCA CGCCCTTTTC CATCGTGCTC GGCCAGGTGG CCATCACACT GTTGTGTGCG CTCGGTTGGT ATGTCGGCAC TTGGTTCGCG GGAGCGGGCG CTGCGTCAGC CGCCGAGGCT GGATTGTCGG CGCTGCTGGG CGGTGGCGTA TGCGTGGTGC CTTCGGCATG GTTCGCGATG CGGCTGTCGA CGGCCAAGGG GTTCGAATCC ATCGCCCGTC TGGTAGTGGG CGAAGCGATC AAGGTGCTTG GCACGGTCGC GCTGCTGGTG ATCGTGGTGG TGGTGTTCAA GGGCCTGCAT TGGCCGCCCT TGCTGATCAC CCTGATCCTG GCGCTCAAGA TGTATTGGGT CGGTCTCGCG CTGCGATAG
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Protein sequence | MQPTDRQRPD SYASLKAARP TSAQDPKRDG WDDEEQAEPP VHVLSHDEAV ALFGEQALQA SRITPFSIVL GQVAITLLCA LGWYVGTWFA GAGAASAAEA GLSALLGGGV CVVPSAWFAM RLSTAKGFES IARLVVGEAI KVLGTVALLV IVVVVFKGLH WPPLLITLIL ALKMYWVGLA LR
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