Gene Rpic_3518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3518 
Symbol 
ID6288673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3688857 
End bp3689738 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content61% 
IMG OID642627103 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001901070 
Protein GI187930583 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0559287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000650144 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACTG AAGTCGCAGA AGCCGCCGGC CACGCCGCCG AGCACGCTCT TACGCCTTCC 
GCGTATATCG CGGAGCATTT GCAGAATTTC AACAGCATCG GTGGCAAGCA GGCCTCCGTC
GTCGACTTCT CCGTCATCAA CTGGGACACG ATGTTCTGGT CCGTGTTGAT GGGCCTGATC
GGCATCATCG TCCTGGGCAT TGCCGCACGC CGCGTCACCG CCGGCGTTCC GGGTCGCTTC
CAGGCTTTCG TTGAACTCGT TGTCGAGATG GTCGACGATC AGGCCAAGGG CATCATCCAC
GGCGATCGTT CCTGGATCGC TCCGCTGGCG CTGATGGTCT TCGTGTGGGT TACGCTGATG
AACGCGGTCG ACCTGATCCC GGTGGACTGG GTCACGGGCG TCAACCACCT GCTCGGTACC
TTCGGCGTGC ACGTCCCGCA CCACCGCGCG GTGGCCACGG CTGACCTGAA CGGTACGTTC
GGCATGTCGT TCGCTGTGCT GATCCTGATG ATCTACTACA GCTTCAAGAT CAAGGGCGCC
GGCGGCTTTG CACACGAGCT GCTGTCGGCA CCGTTCGGCG CCAAGTGGTA CCTCGCGCCA
TTCAACCTGA TCCTCAACAT CATTGAATTC CTCGCCAAGG CTGTGTCGCT GGGCATGCGG
TTGTTCGGCA ACATGTACGC GGGCGAACTG GTGTTCCTGC TGATCGCGCT GCTTGGCTCG
GTCTGGACGT TCGGTGCTGA TACGTCGGCA CTGGGTTTCG TGGGTCACGT GGTGGCTGGC
GCAGTGTGGG CGATCTTCCA CATCCTGATC GTGCTGCTGC AAGCCTTCAT CTTCATGATG
CTGACGCTGG TGTATATCGG CCAGGCACAT GAACACCACT AA
 
Protein sequence
MATEVAEAAG HAAEHALTPS AYIAEHLQNF NSIGGKQASV VDFSVINWDT MFWSVLMGLI 
GIIVLGIAAR RVTAGVPGRF QAFVELVVEM VDDQAKGIIH GDRSWIAPLA LMVFVWVTLM
NAVDLIPVDW VTGVNHLLGT FGVHVPHHRA VATADLNGTF GMSFAVLILM IYYSFKIKGA
GGFAHELLSA PFGAKWYLAP FNLILNIIEF LAKAVSLGMR LFGNMYAGEL VFLLIALLGS
VWTFGADTSA LGFVGHVVAG AVWAIFHILI VLLQAFIFMM LTLVYIGQAH EHH