Gene Rpic_3516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3516 
Symbol 
ID6288671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3687930 
End bp3688400 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content61% 
IMG OID642627101 
ProductF0F1 ATP synthase subunit B 
Protein accessionYP_001901068 
Protein GI187930581 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.346164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000127019 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCTGA ACGCCACACT CGTCGCGCAG ATGGTCGTGT TCTTCATCCT GTGGTGGGTT 
GTTGCCAAAT TCATTTGGCC GCCCCTGGTG AAGGCGCTCG ACGAACGCGC GAAGAAAATC
GCCGATGGCC TGGCCGCTGC CGATAAGGGC AAGGCTGAGC TGGAGCTGGC CAACAAGCGG
GTCGACCAAG CACTGACCGA GGCGCGCAAT GAAGGCGCGC AACGCATCGC GGACGCTGAA
AAGCGCGCCC AGATGACCGC CGATGAGATC AAGCAAAACG CCCAAGCCGA AGCCGCGCGC
ATCATCGCGC AAGCCAAGGC CGAAGCCGAG CAGCAAACCG TGCGCGCGCG TGAATCGCTG
CGTGACCAGG TTGCTGTTCT GGCCGTCAAG GGTGCCGAGC AGATCCTCAA GCGTGAAGTC
AATGCGCAGG TCCACGCCGA TCTGCTCAAT CAACTCAAGG CTGAGCTGTA A
 
Protein sequence
MNLNATLVAQ MVVFFILWWV VAKFIWPPLV KALDERAKKI ADGLAAADKG KAELELANKR 
VDQALTEARN EGAQRIADAE KRAQMTADEI KQNAQAEAAR IIAQAKAEAE QQTVRARESL
RDQVAVLAVK GAEQILKREV NAQVHADLLN QLKAEL