| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3513 |
|---|
| Symbol | |
|---|
| ID | 6288191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3684836 |
|---|
| End bp | 3685711 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642627098 |
|---|
| Product | F0F1 ATP synthase subunit gamma |
|---|
| Protein accession | YP_001901065 |
|---|
| Protein GI | 187930578 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0224] F0F1-type ATP synthase, gamma subunit |
|---|
| TIGRFAM ID | [TIGR01146] ATP synthase, F1 gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00187925 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGAA CAAAAGAAAT CCGCACCAAG ATCAAGAGCG TGCAGAACAC GCGCAAGATC
ACCAAGGCGA TGGAAATGGT CGCCGCATCC AAGATGCGCA AGGCGCAGGA ACGGATGCGT
GCTGCCCGCC CGTACGCCGA GAAGATCCGC AACGTGGCTG CGCACATGGC GCTGGCCAAT
CCGGAGTACA AGCACCCGTT CATGGTTGCG CGCGACATCA AGCGTGCCGG CCTGATCGTC
GTGACGACGG ACAAGGGCCT GTGCGGTGGC TTGAACACCA ACGTGCTGCG TGCCGTCACC
ACCCAACTGC GCGATCTGCA GAACAAGGGC GTTGAGACGC AAACCACCGC CATCGGTACC
AAGGGCATGC AGTTCCTTGG CCGCGTCGGT GCAAAGGTGG TCTCGAATGT CGTGCATCTG
GGCGACACGC CGCATCTGGA AAAGCTGATC GGTGCAATCA AGGTGCAGCT GGACGCGTTC
AACGCTGGCC AGATCGATGC CGTGTACCTG GCGTACACCC GCTTCATCAA CACGATGAAG
CAGGAGCCGG TGGTCGAGCA GCTACTGCCG CTGACCGCCG ACAAGCTCGC GCAGAGCGAT
GCCGAGAAGC AGGCCTACTC GTGGGATTAC ATCTACGAGC CGGACGCGCA AACGGTGGTC
GACGAGCTGC TGATCCGCTA TGTCGAGGCG CTGGTGTACC AGGCGGTGGC CGAGAACATG
GCCTCCGAGC AATCGGCCCG GATGGTGGCG ATGAAGGCGG CTTCGGACAA CGCGAAGAAC
GTGATCGGCG AACTGCAACT GGTCTACAAC AAGACCCGTC AGGCAGCGAT CACGAAGGAA
CTGTCCGAGA TCGTCAGCGG CGCAGCTGCA GTCTGA
|
|---|
| Protein sequence | MAGTKEIRTK IKSVQNTRKI TKAMEMVAAS KMRKAQERMR AARPYAEKIR NVAAHMALAN
PEYKHPFMVA RDIKRAGLIV VTTDKGLCGG LNTNVLRAVT TQLRDLQNKG VETQTTAIGT
KGMQFLGRVG AKVVSNVVHL GDTPHLEKLI GAIKVQLDAF NAGQIDAVYL AYTRFINTMK
QEPVVEQLLP LTADKLAQSD AEKQAYSWDY IYEPDAQTVV DELLIRYVEA LVYQAVAENM
ASEQSARMVA MKAASDNAKN VIGELQLVYN KTRQAAITKE LSEIVSGAAA V
|
|---|
| |