| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3510 |
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| Symbol | |
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| ID | 6288244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3680383 |
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| End bp | 3682782 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642627095 |
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| Product | putative proline-rich transmembrane protein |
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| Protein accession | YP_001901062 |
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| Protein GI | 187930575 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000863907 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCAAAG TTTCCCGTCG TTCCCCCCTT TCCGGTGTAC GGCTGCCGTA TGTGTTGCGC
GCGGTAGGTG TTGCCGCCGT GCTGCTGGTC TGCGGTGCGC AGGCCGCGAT GGCAGCCGAT
CCGGCTTCAC GGGTGGCGCG GCTGTCGGAC TTTTCCGGCA CGGTGAGCTT CGCGCCCGCC
GGCTCCGATG ATTGGGCCGG CGCCTCGCTC AACCGCCCGC TCACCACGGG TGACCGCCTG
TGGTCCGACC AAGGCAGCCA CAGTGAGCTC CACGTCGGCT CCACAGCGTT GCGCCTGGGC
CAGAACACCG GCGCCACGCT CGTCGACCTG GACGACCGCA ACACGCAGGT GAAGCTCACG
CAAGGCGCGC TGTCGGTACG CGTGCGGTCG CTGCCGGCCG ACCAGACCAT CGAGATCGAT
ACGCCCAACC TGGCGTTCAC GCCGCAGGCA CCGGGCGAAT ACCGTCTTGA CGTCGCCCCC
GATGGTTCGA GCACGACCGT CACCGTGTGG CACGGTCAGG GCACGGCCTA CGGCGATGAC
CGCTCCACGC CGCTGGGCGC AGGTCAGCAA ATCCGCTTCG GCGGCACGGA CCTCGCCGAG
GCCGGCGGCA CCGACAACCC AGGTCGCGAC GCCTTCGACC GCTGGGCCGA ATCGCGCGAT
GCACGCGAAG ACGCTTCGGT CTCCGCCCGC TACGTCGGCC GCGAAATGAC CGGCTACGAG
GCCCTCGACG ACAACGGCAC CTGGCGTGAA GAAGACGGCT ATGGCGCCGT GTGGGTACCG
CGCGCCGTGC CCGTCGGCTG GGCACCGTAT CGCACGGGCC ATTGGGCCTG GGTGGCGCCC
TGGGGCTGGA CGTGGGTGGA CGACGCGCCG TGGGGCTTTG CGCCTTTCCA CTACGGCCGT
TGGGCGTACG TCGGCACGAC GTGGTGCTGG GTGCCGGGAC CGGTGGTACC GCGGCCGGTC
TATGCGCCAG CGCTCGTCGG CTTCGTGGGC GGCGGAGGCG GCGGTGGAGT GAGCTGGGGG
ATCAACATCT CGATCGGCTC GCCGGGGGTG GCATGGTTCC CGCTGGCGCC GGGCGAGGCG
TATCGCCCGG TGTATGCGGC CAGCCCGACC TACGTGACGA ACATCAACCG CACGGTGGTG
GTGAACAACG TCACGGTCAA CAAGACCATC ATCAACAACA CCACCAACGT GACCAACGTT
CGCAACGTGA ACCGCGTCAC CTATGTCAAT GCCAACAACC CAGCCGCACT GACGGCGGTG
CCAGCCAAGA CCTTCGTCAA CGGCCAGCCG GTCGGTCCCG CCATGACGCA TCTGCGACCG
GAACAATTGC GCGCGCAGAT GGCGCATGCG CAGTTTGTGT CGACGCCGGC GCTGGCACCG
CTGCGTGCCA GCCTGGTGGG TGCAGCGGCC AACGGCGGGC CGCACCAGTT GCCGCCGCAG
CAGGCGTTTG CACGTCAGGC GATTGCAGTA CGAGCACCCG CCGCGCCGGC AGGTGGACAC
GATGCATTGG CAGAACGGTT CCGCTCTCAA GGCGGTGCGC TCCCGGGCGC TGGCCCGGCA
TGGACGGGCG GCAACGTGAG CGCCCGCGTT GCGCCAGTGC GAGGCCACGC CGATACGGGA
ATGCCGACCG CGCCAGCCGC TGCGCAGGCA GCGGGTCTAC GGTTGACCCG CGCCGCGCCG
AGTGGGCCCA ATGGACCAAA TGGGCCCTCA CGCGCCGGTA ACGAGCTTGG CCGACCGGCG
GAACAACGCG GTCCGAATGG GCCGCAAGGG TTGATGGGCT CCCCAAACCC GCAGAATGCG
CAGACGGCCC ATGGTGCCCA ACCTGGATCA GCTCCACAGG GTCTGATGGC CCCGGGCGCG
ATCAACCGGC CACGCCCGCT GCCGGGTGCC GCCGCGCCGC AGGACCGCCC GGGACAACCG
CAGACTACAC AGGCGCCACA AGGCCCGGCG GGCATGACGA CACGTCCACC GCTGCGCGAC
GGCGCGCCCG GTACACCGCG AGACGAGCGC CGCGCCTTCG AACCGCGTCC GCAACTGCCG
CAAGCCGGCG CGCAAGCGCC ACAACCTCAG CCGCAGCGCG GCGGCCAGGA GCCGAATCGC
TTCAACGGTA ACCCGGCACC GGCCATGCAG GAGCGCCAGC ACAACGAACC GCCGCAGATG
CGCGCACGCC CCGAGCCCGA ACAACGCCGG CCGGAACCGC ACATGGAAGC CCCGCGTCCC
GCACCGCAAC CGCACGTTGA GATGCGCCCG CCACAGCCGC AGCCTCAACC GCGTCCGCCT
GAAGCTCGTG CGCCACAACC GCAGCAGCAG GCACAACCAC CTCGGCAGGA ACACCACGAG
GCCCAGCCGC ATCCGCAAGG CAATCGCGGT GATGAGAAGC GCGAAGGTGA GCACCGCTGA
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| Protein sequence | MSKVSRRSPL SGVRLPYVLR AVGVAAVLLV CGAQAAMAAD PASRVARLSD FSGTVSFAPA
GSDDWAGASL NRPLTTGDRL WSDQGSHSEL HVGSTALRLG QNTGATLVDL DDRNTQVKLT
QGALSVRVRS LPADQTIEID TPNLAFTPQA PGEYRLDVAP DGSSTTVTVW HGQGTAYGDD
RSTPLGAGQQ IRFGGTDLAE AGGTDNPGRD AFDRWAESRD AREDASVSAR YVGREMTGYE
ALDDNGTWRE EDGYGAVWVP RAVPVGWAPY RTGHWAWVAP WGWTWVDDAP WGFAPFHYGR
WAYVGTTWCW VPGPVVPRPV YAPALVGFVG GGGGGGVSWG INISIGSPGV AWFPLAPGEA
YRPVYAASPT YVTNINRTVV VNNVTVNKTI INNTTNVTNV RNVNRVTYVN ANNPAALTAV
PAKTFVNGQP VGPAMTHLRP EQLRAQMAHA QFVSTPALAP LRASLVGAAA NGGPHQLPPQ
QAFARQAIAV RAPAAPAGGH DALAERFRSQ GGALPGAGPA WTGGNVSARV APVRGHADTG
MPTAPAAAQA AGLRLTRAAP SGPNGPNGPS RAGNELGRPA EQRGPNGPQG LMGSPNPQNA
QTAHGAQPGS APQGLMAPGA INRPRPLPGA AAPQDRPGQP QTTQAPQGPA GMTTRPPLRD
GAPGTPRDER RAFEPRPQLP QAGAQAPQPQ PQRGGQEPNR FNGNPAPAMQ ERQHNEPPQM
RARPEPEQRR PEPHMEAPRP APQPHVEMRP PQPQPQPRPP EARAPQPQQQ AQPPRQEHHE
AQPHPQGNRG DEKREGEHR
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