Gene Rpic_3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3509 
Symbol 
ID6288243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3678629 
End bp3679771 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content67% 
IMG OID642627094 
Producthypothetical protein 
Protein accessionYP_001901061 
Protein GI187930574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00457294 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACAGGC ATGCGATGCA CGATGTGTTG CAGAAGTCGG TGAGGGCGGG CGTTTTTGTT 
ACCTTGATGG GGGCACTTGG CGGGTTGGGC AGCGCACAGG CCGGAACAGA AGCGGTCTTC
GCTGCGCCTG CAGCACCCGC GAGTGCGCCG CCCGCCTCGG CACCTGTTGC TTCTGCGCCA
ACTGTCCCCC TTGCAAAAAC GAAAGAGCAG CACGAGCGCC TGGCGGGTAG TTTCTGGCAG
GGCACGGTGG GAAAGGGCGC CGACAGCCCA GGGTGGAACG TCTGGCTGAA CGTGTACGAC
CCGCCACCCA GAGGGCAGGA CGCGGACAAG GACCCGGTGG CCGACACGCT GACTGGCGAT
GCCTACGACG ACCGCCCCCA GGGCCGCACC TTCTGGACCA TCGAAGGGCG CAACGTACCC
GAGCGCCGCT TCGTGTGGCG CGAGCGCGCA GAAGCACTCG ATGCGGCTGG CCAGCCCGTC
GTGCGCGAGG GCGGCACGCT CTCCGGTGCG CTGTCGGCCG ACGGCTCCAC CGCCACCGGC
ACCTGGAGCG ATGGTGGCCG CAGTCAACCC TTCACGCTCA AGCGCGTGGC GCGCTATCAG
GAGTCCACGG GCGCTTCCGG CCAGGCCAAG CTGACCGAGC GCTATCCGGT GACGGGCGAT
GCCGGCATCG ACACGCTGAT CCAATCGCTG CGCGTGCGCA AGTGCGATCA ATTCGACAAC
GAATGCGTCA TCCGCATCAG CGCCATCGGT TTGGGCGACA CCGTGAGCCT CTTGCGCATG
GTCTGGGCCT ACAGCGGCGG CGCGCACGGC AACTACAGCT TCACCGCCGG CAACTGGCGA
CGCGGTGCGC AGGGCTTCCA GCCGATCGCC TTGGCCGATG TGCTGAACCC CACATCCGCC
TGCCTGCAGA GCTTCAATAC GCAGATTGTC GATGCGCTCA AGCGCGAAGG CGCACCCGAT
GCGCCGCGCG GCGCCCTCAA GGAGCGCGAC CTGCGTAACG CCGCGTTTCC GTTTACGCTG
CAAGGTGACC GCATCGTCGT GCACTACGGG CCGTATGAGG TCGGACCCTA TTCGTCGGGC
GCGTTCCGTG CTGCCGTGCG CATCGATGAC CTGGGCGCCG CATGCAAGCG GCCCGCAACC
TGA
 
Protein sequence
MHRHAMHDVL QKSVRAGVFV TLMGALGGLG SAQAGTEAVF AAPAAPASAP PASAPVASAP 
TVPLAKTKEQ HERLAGSFWQ GTVGKGADSP GWNVWLNVYD PPPRGQDADK DPVADTLTGD
AYDDRPQGRT FWTIEGRNVP ERRFVWRERA EALDAAGQPV VREGGTLSGA LSADGSTATG
TWSDGGRSQP FTLKRVARYQ ESTGASGQAK LTERYPVTGD AGIDTLIQSL RVRKCDQFDN
ECVIRISAIG LGDTVSLLRM VWAYSGGAHG NYSFTAGNWR RGAQGFQPIA LADVLNPTSA
CLQSFNTQIV DALKREGAPD APRGALKERD LRNAAFPFTL QGDRIVVHYG PYEVGPYSSG
AFRAAVRIDD LGAACKRPAT