Gene Rpic_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3502 
Symbol 
ID6288463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3672854 
End bp3673783 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content67% 
IMG OID642627087 
Productfatty acid hydroxylase 
Protein accessionYP_001901054 
Protein GI187930567 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0956724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTGC TGTTCACCAT CCTGAAGATC GCCGTCGTGC TCGTGCTGGT GTCGTCGCTG 
GCCGAGGCGA TCGTGCTGTC GCTGAGAAAC GGGTGGGCCA GCTACGACTG GAAGGCCGCC
GGCGTGTCGG TGGTCGATTT CCTGGTACGC GAGTACCCAC TACGCTGGCT GCTGCCTCTG
GCGTTCTGGA CGCAGGGCCT CGAATGGGTC TACCAGCATC GTCTCTGGAC GCTGCCGATG
GACCACTGGA CGGGCTGGGC CGCGTGCTTT CTCGGCCAGG AGTTCTGCTA CTACTGGTAC
CACCGCGCCG CGCACCGCGT GCGCTGGTTC TGGTGCACGC ATGCCATCCA CCACTCGCCG
AATGACCTGA ACCTCTCGGC TGCCTACCGC TTCGGCTGGA CGGGCCGGTT GACCGGCACG
CTCGCCTTCT TTGCGCTGGC GCCGCTGCTG GGCATGCCGC CGCGCATCGT GCTGATGCTG
CTGTCGCTCA ACCTGCTGTA CCAGTTCTGG ATCCACGCCA CGTGGATTCC CCGCCTGGGG
CCCCTGGAAT GGGTGCTGAA CACGCCCTCG GCACACCGCG TGCACCACGC GTCCAACCTC
GAATATCTGG ATGGCAACTA CGGCGGCGTG CTGATCGTGT TCGACCGGCT GTTCGGCACC
TACATCCCCG AACGCAAAGA CGTGCCGTGC CGCTACGGCC TCGTGCACCC GATGCGCACG
TACAACCTGC TGGTGATCGA ATTCGCGCAC TGGCGGGCGC TGTGGCAAGA CCTGAAGACC
GCCCGCTCGG CCGGCGAGGT TTTTGGCTAC CTGTTCCGCC CGCCGGGCTG GCGGCCCGAT
GGCCGTGGCG AGACAACGGA GGATCTGCGT CGCCGCGCCG CGCTCATTCC CGACGAGCCC
GTCGTCGCCC CGGCCGTTGC TGCGAACTGA
 
Protein sequence
MAVLFTILKI AVVLVLVSSL AEAIVLSLRN GWASYDWKAA GVSVVDFLVR EYPLRWLLPL 
AFWTQGLEWV YQHRLWTLPM DHWTGWAACF LGQEFCYYWY HRAAHRVRWF WCTHAIHHSP
NDLNLSAAYR FGWTGRLTGT LAFFALAPLL GMPPRIVLML LSLNLLYQFW IHATWIPRLG
PLEWVLNTPS AHRVHHASNL EYLDGNYGGV LIVFDRLFGT YIPERKDVPC RYGLVHPMRT
YNLLVIEFAH WRALWQDLKT ARSAGEVFGY LFRPPGWRPD GRGETTEDLR RRAALIPDEP
VVAPAVAAN