Gene Rpic_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3500 
Symbol 
ID6288461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3670311 
End bp3670658 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content60% 
IMG OID642627085 
Productglutathione-dependent formaldehyde-activating GFA 
Protein accessionYP_001901052 
Protein GI187930565 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.108548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACA AAGGAAGCTG CCACTGCGGC AACGTCGCGT TCGAAGTTGA GGGGCATCCC 
GAAAACGCGA TGGCATGCAA CTGCTCGATC TGCCAGCGCA AGGGGTCGCT GCTGTGGTTC
GTGGCCCGCG ACAAGGTGCG ATTGCTCACG CCGGAAGACA ACGCCAGCAC CTATCTCTTC
CACAAGCATG TGATCAAGCA CCGCTTCTGC CCGACCTGCG GCATCCATCC CTATGCAGAG
GGCGCGATGC CCGACGGCAC ACCAATGATT GCCGTCAACG TCCGCTGCCT GGAAGACATC
GATCTGACCA GCGTGCCGGT CACCCACTTT GACGGGCGGT CAATGTAG
 
Protein sequence
MTHKGSCHCG NVAFEVEGHP ENAMACNCSI CQRKGSLLWF VARDKVRLLT PEDNASTYLF 
HKHVIKHRFC PTCGIHPYAE GAMPDGTPMI AVNVRCLEDI DLTSVPVTHF DGRSM