Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3499 |
Symbol | |
ID | 6288654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3669611 |
End bp | 3670096 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642627084 |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_001901051 |
Protein GI | 187930564 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.163476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGCC ATCGTCCTGT TACCGTGATC CGGTCGGTTT CTGCCGCCGC CATCTTTGCC GGCTGCGCCG GCGCGTTTGC GCAAGCGTCG CAACCGGCTG CGGCAGCGGC TCCACCCTCG GCACCGCCGC TCTCGGCGCA GATCATCAAC ATGGGCGGTA TGGCCCCGGA CGAGGTCGGC CCAGTCATCG CCGAGATGGG TACGCTGCGC ACCAAGACGC TGGTGACGGC GGCCAATGGC ACGGTGGGCG TCCAGGTCGG CACCGTGGCC AAGCACACGC ACACGTACTC CGACGAGATC CAGTATGTAA TGTCGGGCAC GGCCACCGTC TGGCTCGACA ACGCGCCGCG CGAGGTCCGG GCGGGTGATC TGATCGTGAT CCCTCGTGGC GTGGTGCACG GAACGCTGAC CACCAGCACG GATTTCAAAT CGATGGCGAT CAAGCTGCCG CCGCAGCGCG CCGGCGATAC ACACAAGGTG CCGTGA
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Protein sequence | MHRHRPVTVI RSVSAAAIFA GCAGAFAQAS QPAAAAAPPS APPLSAQIIN MGGMAPDEVG PVIAEMGTLR TKTLVTAANG TVGVQVGTVA KHTHTYSDEI QYVMSGTATV WLDNAPREVR AGDLIVIPRG VVHGTLTTST DFKSMAIKLP PQRAGDTHKV P
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