| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3497 |
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| Symbol | |
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| ID | 6288652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3665534 |
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| End bp | 3667831 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642627082 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_001901049 |
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| Protein GI | 187930562 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.631062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGT CCCAAGTCGA CGCCGCGTTT TCTGATGCCA AGGTGTCGGC CTCCATTGCT
CGCGTGGTGA TTGATACGCC GCTCGATGCG GTGTTCGATT ACCGGTGTGG GCAGCCCGTG
CTGCCGGGGC AATTGGTTGT GGTGCCGTTT GGCAACCGGC GTGTGGCGGG GTTAGTCGTC
GAAACCGCCG CGACCACCGA TGTGCCGCAA GAAAAGCTGC GCGATGTCGA GCGGGTGCTC
GACTGGGTGC CGCCGCTCGA CGCCGAATGG CGGGCCCTGG CCGAATTTGC TGCCGGCTAC
TACCACCGCG CGCTCGGCGA AGTGACGTTA CCGGCGCTCC CGCCGCTGTG GCGAACCCCG
GGCAGTTGGG ACAGTCTCGC CCGGCAGGCC ACCGAAACCG TCTACGTGAT GTTTGAACCG
GCCCGGGCAG CGTTGCTGGA CAGCATTCCG AAACGTGCGT CTGGCGCCAT GCGATTGGCC
GAAGCGCTGA CCGGCGATGG CGAGCTGTCC ACCAGCGCTG CTGTTGAACT GCACGGGCAA
GCCGTCGCCA AGCTGCGGGA TTGGACGTCC GTCGGCTGGC TGCGCGCAGA ACTGCGGCCG
AAGGCGCTGT TGCCGCAACC GCTCGAACTG CCACTGCCTT CCATCGCGCC CGCACTGAAC
GACGAACAGA CCGCCGCCGT GGCAGCCATT GCCCAGGCGG GGGCGGCCGG CAACTTCAGC
CCGTTCCTGT TGTACGGCGT CACCGGCAGT GGCAAGACCG AGGTTTACCT GCACGCCATC
GCCGACGCCT TGGCGCGCGA GCCCGCCGCA CAGGTCCTGA TGCTGGTGCC CGAGATCAAC
CTGACGCCAC AACTGGAGGC GCGCATTGCG GCGCGTTTTC CCAGTGTGCC CATGGCGGCG
CTGCACAGTG GTCTGGCCGA ACAGCCGCGT GCGCTGAACT GGCTGGCCGC CCATCGCGGT
GAGGCGCGCA TCGTGCTTGG CACGCGGCTG GCGATGCTGG CGTCGCTGCC CAAGCTCGCG
CTCATCCTCG TCGACGAGGA ACACGACACT TCGTACAAGC AGCAGGAGGG CCTGCGCTAT
TCCGCACGCG ACCTGGCGCT ATGGCGCGCC AAGCAGCGCA ACATCCCCGT CGTGTTGGGC
TCGGCCACGC CGTCGCTGGA GACCTGGTGG CGCGCGGAGC AGACGCCCAC CACGCGCCTG
ACGCTCTCGC GGCGCGCGCA GGCCGAAGCA GTGCTGCCGC GCGTGTCGCT GATCGACCTG
AATCTGGAGC GCCGCGCCGG GCGCCAGATT CGCGATGGGC TGTCCAAGCC ACTTGTCGAT
GCGATTGCCG ATCGTCTGGC GCGCGGCGAA CAGAGCTTGC TGTTCCTCAA CCGCCGCGGC
TACGCGCCCG TGCTCTCGTG CGACGCGTGC GGCTGGCTGT CGGGCTGTCC GCGCTGCTCG
GCGTACCTGG TGCTGCACAA GCCCGAGCGG CGCCTGCGCT GTCACCACTG CGGGTACGAA
TCGCGCATTC CGCATCACTG CCCAGACTGC GGCAACGTCG ACATCGCGCC GCTCGGGCGC
GGCACCCAGC GCATCGAAGA GACGCTCGGC GAGCTGTTTC CGCAGGCCCG CGTCGCCCGC
ATCGACGCCG ATTCCACGCG CCGCAAGGGC AGCGCCGAAG CGCTGTTCGA CACCGTGCAC
GAAGGCAGCG TCGACATCCT GATCGGCACG CAGATGGTCG CCAAGGGGCA TGACTTCCAG
CGCGTGACGC TGGTGGGCGT GGTCGCGCCC GACCCCTCGC TGTTCTCGCA CGACTTTCGC
GCAGGCGAGC ATCTCTTTGC ATCGCTGATG CAGGTGGCGG GGCGCGCGGG CCGGGCGGGG
TTGGCGGGCG AGGTGCTGAT TCAGACGCGG TATCCAGATG CTCCGGCGCT GCAGGCGCTG
GTTCGGCACG ACTACGATGG GTTTGCGCGC CAATTGCTGC GGGAGCGCAA GCAGGCCGGG
CTACCGCCGT TTGCCTATCA GGCGCTGCTC ACTGCCGAGC ACAAGGAAGT CGCGCGGGCG
CTTGAATTCT TGAGTGCTGC GCGCTCGGCA GGTGAAGCCT TGGCTGCTGA ATTGGGTGCG
CCAGTGTTCT TGCATGACCC GGTGCCGATG ACGATGGTGC GGCTGGCCAA CCGCGAGCGG
GCGCAGTTGC TGGTGGAGTC GGGTTCTCGG GCGGCTTTGC AGAAGCTTTT GACTGCCTGG
ACTGAGGGGT TTGCGGGGAT CGGCAAGACG GTGAAGGGGG TGCGGTGGCA GTTGGAGATT
GATCCTTTGC GGATTTGA
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| Protein sequence | MTTSQVDAAF SDAKVSASIA RVVIDTPLDA VFDYRCGQPV LPGQLVVVPF GNRRVAGLVV
ETAATTDVPQ EKLRDVERVL DWVPPLDAEW RALAEFAAGY YHRALGEVTL PALPPLWRTP
GSWDSLARQA TETVYVMFEP ARAALLDSIP KRASGAMRLA EALTGDGELS TSAAVELHGQ
AVAKLRDWTS VGWLRAELRP KALLPQPLEL PLPSIAPALN DEQTAAVAAI AQAGAAGNFS
PFLLYGVTGS GKTEVYLHAI ADALAREPAA QVLMLVPEIN LTPQLEARIA ARFPSVPMAA
LHSGLAEQPR ALNWLAAHRG EARIVLGTRL AMLASLPKLA LILVDEEHDT SYKQQEGLRY
SARDLALWRA KQRNIPVVLG SATPSLETWW RAEQTPTTRL TLSRRAQAEA VLPRVSLIDL
NLERRAGRQI RDGLSKPLVD AIADRLARGE QSLLFLNRRG YAPVLSCDAC GWLSGCPRCS
AYLVLHKPER RLRCHHCGYE SRIPHHCPDC GNVDIAPLGR GTQRIEETLG ELFPQARVAR
IDADSTRRKG SAEALFDTVH EGSVDILIGT QMVAKGHDFQ RVTLVGVVAP DPSLFSHDFR
AGEHLFASLM QVAGRAGRAG LAGEVLIQTR YPDAPALQAL VRHDYDGFAR QLLRERKQAG
LPPFAYQALL TAEHKEVARA LEFLSAARSA GEALAAELGA PVFLHDPVPM TMVRLANRER
AQLLVESGSR AALQKLLTAW TEGFAGIGKT VKGVRWQLEI DPLRI
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