| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3485 |
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| Symbol | |
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| ID | 6286301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3645350 |
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| End bp | 3647470 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642627070 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001901037 |
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| Protein GI | 187930550 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.162451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCG GTCTCGCCCA CGGGCTCAAT GCTGCCCAAT CCGAAGGTGT GCATTACCTC
GACGGCCCAT GCCTGGTGCT GGCCGGGGCG GGCTCGGGCA AGACGCGCGT GATCACGCAG
AAGATCGCGC ACCTGATCCT CGACAAGGGC TTCGAGCCGC GTCACATCGC CGCCGTCACG
TTCACCAACA AGGCGGCCAA GGAAATGCAG GAGCGCGTGG CCAAGCTGAT GGACGGCAAG
ACGCGCGAAG ACGGCAAGCG CATTCCCATC AAGCAGTTGA CGGTCTGTAC GTTCCACTCG
CTGGGCGTGC AGATCCTGCG GACCGAAGCC GAGCACGTGG GCCTGAAGCC GCGCTTCTCG
ATCATGGATT CGGACGACTG CTTCGGGATG ATCCAGGAGC AGTTGGCGAC CACCGACAAG
CAGTTGATCC GCCGCGTGCA GAGCACGATC TCGCTGTGGA AAAACGGTCT CGTCGATCCG
GACACCGCGA TTGCCGAGGC GCTCGCCAAC AACAATGTTG ATGATCACCA GGCGGCGCTC
GTCTACCGCA ACTACGTGGC GACGCTGCAT GCGTATCAGG CGGTGGATTT TGACGACCTG
ATCCGGATTC CCGCCGAGCT GTTCGCGCGC AATGAAGAGG TGCGCCTGAA GTGGCAGAAC
CGTCTGCGCT ACTTCCTCGT CGATGAATAC CAGGACACCA ACGCTTGCCA GTATCAACTG
TTGAAGCTGC TGGCGGGGGG CTCGCACTTG CGTGCGCCGG CCTTCACGGC GGTGGGCGAC
GACGATCAGG CCATCTATGG CTGGCGGGGC GCCACGCTCG ACAACCTCAA GCTGCTGCAG
ACGGATTTCC CGAACCTGAA GGTGATCAAG CTGGAGCAGA ACTACCGCTC CACGGTGCGT
ATTCTGAATG CCGCCAACGC GGTCATCGCA CAGAACCCGA AGCTGTTCGA GAAGACGCTG
TGGAGCGAGC ACGGCATGGG CGACGCGATC AACGTGACGA GCGCCAATGA CGAGGAGCAC
GAGGCCGAGA GCGTCGTCTT CAAGCTGTCC GCCCACAAGT TCGAGCGCCG CGCGCAGTTT
CGGGATTACG CGATTCTGTA TCGCGGCAAC TTCCAGGCGC GTCTGTTCGA GCAGATCCTG
CGGCGCGAGC GCATTCCGTA CGTGCTCTCG GGTGGGCAGA GCTTTTTCGA CAAGGCCGAG
ATCAAGGATC TGTGCGCGTA TCTGCGCCTG ATTGCCAACG CGGATGATGA TCCTGCGTTC
ATCCGCGCCA TCACCACACC CAAGCGCGGC GTGGGGAATG CGACGCTCGA AGTGCTGGGT
TCGTTTGCGG GGCAGGCCAA GGTGTCGCTG TTCGAGGCGG CGATGATGGG TGGTATCGAA
GCACAGCTTG CGCCGCGCCA GCTTGAGCCG TTGCGCGTGT TCTGCGAGTT CATCGTGCGG
CTGTCGGACC GCGCCGCCAA GGAGCCTGCT GCCACGCTGC TCGACGAGAT GATGGAAGGC
ATCCATTACG AGGCCTACCT GTACGACACC TATGACGAGC GCCAGGCCCA GAACAAGTGG
ACCAACGTGC TGGAGTTTCT CGACTGGCTC AAGCGCAAGG GCACCAAGCC GGAGAAGGAA
AGCGAAGAAG ACGCCACCGG TTTCGACAAT GCCGATGGCC TGATGGACGC CGGCAAGAAC
CTGCTGGAAC TCACGCAGAC CATCGCGCTG ATCAGCATGC TCGAAGGCCG GGAAGAGGAC
CCGGATGCGG TGCGCCTGTC CACGCTGCAT GCGAGCAAGG GGCTGGAGTA TCCGCACGTG
TTCCTGGTCG GCGTGGAAGA GGGCATCCTG CCGCACTGCC GCGAAGACGA TGAGTTGACC
GACGAGAAGA TCGAAGAAGA ACGGCGGCTG ATGTATGTGG GTATCACGCG GGCACAGCGC
AGCCTGCATA TCAGCTGGTG CAAGAAGCGC AAGCGCGCGA GAGAGACGGT GGTGTGTGAG
CCGTCGCGCT ATATCGCCGA GATGAAGCTT GGGGAAGATG CCGGCCCGAC GCCGGAGGAC
ACCATGCCGG CGATGTCGCC GAAGGATCGG TTGGGGGCGT TGAAGGGGTT GTTGGCGGCT
AAGAAACCTG TGGCTTCGTG A
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| Protein sequence | MSSGLAHGLN AAQSEGVHYL DGPCLVLAGA GSGKTRVITQ KIAHLILDKG FEPRHIAAVT
FTNKAAKEMQ ERVAKLMDGK TREDGKRIPI KQLTVCTFHS LGVQILRTEA EHVGLKPRFS
IMDSDDCFGM IQEQLATTDK QLIRRVQSTI SLWKNGLVDP DTAIAEALAN NNVDDHQAAL
VYRNYVATLH AYQAVDFDDL IRIPAELFAR NEEVRLKWQN RLRYFLVDEY QDTNACQYQL
LKLLAGGSHL RAPAFTAVGD DDQAIYGWRG ATLDNLKLLQ TDFPNLKVIK LEQNYRSTVR
ILNAANAVIA QNPKLFEKTL WSEHGMGDAI NVTSANDEEH EAESVVFKLS AHKFERRAQF
RDYAILYRGN FQARLFEQIL RRERIPYVLS GGQSFFDKAE IKDLCAYLRL IANADDDPAF
IRAITTPKRG VGNATLEVLG SFAGQAKVSL FEAAMMGGIE AQLAPRQLEP LRVFCEFIVR
LSDRAAKEPA ATLLDEMMEG IHYEAYLYDT YDERQAQNKW TNVLEFLDWL KRKGTKPEKE
SEEDATGFDN ADGLMDAGKN LLELTQTIAL ISMLEGREED PDAVRLSTLH ASKGLEYPHV
FLVGVEEGIL PHCREDDELT DEKIEEERRL MYVGITRAQR SLHISWCKKR KRARETVVCE
PSRYIAEMKL GEDAGPTPED TMPAMSPKDR LGALKGLLAA KKPVAS
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