Gene Rpic_3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3464 
Symbol 
ID6287707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3622094 
End bp3622996 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content69% 
IMG OID642627049 
ProductUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 
Protein accessionYP_001901016 
Protein GI187930529 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATC CTGACTGGAC CCTGCTGGCG CACGACCAGC ACTATCCCGC CGGCGCATTA 
TATGTGGTGG CTACCCCCAT CGGGAACGCT GCCGACGTGT CGCTGCGGGC GCGTTACGTG
CTGGGCATCG TCGACGCGGT GGCCTGCGAA GACACGCGCA ATACCGGGCA ACTGCTCCAT
CGGCTGGGGC TGTCGCGGCC GATGCTCGCG GCGCACGAAC ACAACGAGCG CGAGGCCGCG
GCGCGCATCG TCGCGCGGCT GGCGCAGGGC GAGCGCATCG CCTATGTGTC GGATGCGGGC
ACGCCGGGCG TATCGGACCC GGGCTCGCGC ATTGTCGAGG CGGTGCGCGC TGCAGGCCAG
CGCGTGATTC CGCTACCGGG CGCGAGCGCG GTGGTGACGG CGCTTTCCGC CGCCGGGGAA
TTGCTCGACA CGTCCGGCGG GCAGTTCACC TTCGTCGGCT TCCTGCCGCC CAAGGCCGGG
CAGCGCGAAG CGGCCATCCG CCAATGGGCC ACGCACGGGC CGGCATGGGT TCTGTACGAG
GCGCCGCATC GCATCGAGGC CACGCTCGCC GCGTTGGCAG AACACCTGCC CGCCCGACGC
ATCCTGATCG GCCGCGAGTT GACCAAGCTG TTCGAGCAGA TCGTCGTGCT GCCCGCTGCG
GATGGGCCCG CATGGCTTGC CGCCGATGCC TCGCACGGCA AGGGTGAATT CGTGCTGGTC
GTGGAAGGCG CAGGCGCGCA GGACGCGGCA CCGACCGCCA TGGCGGCGGA TCAGGTCTTG
CGTCTGCTAT TGGTCGAGCT GCCCGCCAAG CGCGCAGCCA AGCTGGCCGG AGCGATTACG
GGCGCGTCGG TAGACACGCT GTATCAGAGC GCGCTGGCGT TGAAAAACGA AGGGAAGGAC
TGA
 
Protein sequence
MSDPDWTLLA HDQHYPAGAL YVVATPIGNA ADVSLRARYV LGIVDAVACE DTRNTGQLLH 
RLGLSRPMLA AHEHNEREAA ARIVARLAQG ERIAYVSDAG TPGVSDPGSR IVEAVRAAGQ
RVIPLPGASA VVTALSAAGE LLDTSGGQFT FVGFLPPKAG QREAAIRQWA THGPAWVLYE
APHRIEATLA ALAEHLPARR ILIGRELTKL FEQIVVLPAA DGPAWLAADA SHGKGEFVLV
VEGAGAQDAA PTAMAADQVL RLLLVELPAK RAAKLAGAIT GASVDTLYQS ALALKNEGKD