Gene Rpic_3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3460 
Symbol 
ID6287024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3619042 
End bp3620334 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content69% 
IMG OID642627045 
ProductFlavocytochrome c sulphide dehydrogenase flavin-binding 
Protein accessionYP_001901012 
Protein GI187930525 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC GGCTGCGCAA GGATCGACGC GCACTCCTGC GTGCGCTCGG GGCAACTGCG 
CTTGCCGGGC CGCTGGCCGC ATGCGCTTCG CTGTCGGGTG TGCGCAATGC GCGCGTTGTA
GTGGTTGGCG GCGGCTACGG CGGCGCGACG GCTGCCAAGT ATGTGCGCGT GTTTTCCGGC
GGCCATGTCG ACGTGACGCT GGTCGAGCCG AACGCCGCGT TCGTCTCATG CCCGCTGTCG
AATCTCGTGC TGTCGGGCGA CCGTGACATG GCGTCGATCA CCGTGCCGTA TGACGCGCTG
GTCGAGCGCC ACGGCGTGCG GTGGGTGCGC GACCGCGCAT CGGCCATCGA CCCTGGCGCC
AAGCAGGTGC GGCTGGCAGG CGGCGGCACG CTTGATTACG ACCGGCTGAT CCTCTCGCCC
GGCATCGATT TCGTGCCCGG AGCCATCCCG GGTCTCGCCA ATGCGGCCAC CGCGGCGCAG
GCGCCGCACG CATGGAAGGC CGGCGTGCAG ACGCTGGCGC TGCGCCATCG GCTCGAAGCC
ATGCCCAACG GCGGCACGGT GGCGATCAGC ATTCCGCTGG CGCCATACCG CTGCCCGCCC
GCGCCGTACG AGCGTGCGTG CCTGATCGCC AACTGGCTGC AGCGCGCCAA GCCCGATTCG
CGCGTGCTCA TCCTCGATGC CAACGACGAC GTCACGTCCA AGGGGGCGCT GTTCAAGCGC
GTGTGGGCAG AGCGTTATCC ACAGCACATC GAATATCGCC CGCAATACAA CGCCGTCGAC
ATCGATGCCA CGGGCCGCGT GCTCAAGTTC GATGTGCAGG ACGACGTGCA GGCCGATGTC
GTCAACCTGA TCCCGCCGCA GCGCGCCGGG GCGATTGCCG TGCAAGCCGG GTTGGCGACG
GCCAACGGGC GCTGGTGCGA AGTGGACTTC CTGTCGTTTG AATCCAAGGT GGCGCCGGGC
GTGCATGTGA TTGGCGATGC CATCCAGACC GCGCCGCTGA TGCCCAAGTC GGGCCACATG
GCCAATCAGC ACGGCAAGGT GGCCGCCGCC GCCGTGGTGG CGATGCTGGC CGGGCACGCG
CCCGATGCGT CACCGCTGTA CACCAACACC TGCTACAGCT TTGCCACGCC CGACGAGGCC
ATGCACGTGG CAACCGTCCA CCGTTACGAC GCGACCGAGC ACACCATGGT GACGGTGCCC
GGCGCCGGCG GGCTTTCCGA CGTGCCTTCC GCAGCGGAGG GCAAGCTGGC GCAAGGCTGG
AGCCGCGCCA TCTGGTCGGA CATGCTCGGT TGA
 
Protein sequence
MSERLRKDRR ALLRALGATA LAGPLAACAS LSGVRNARVV VVGGGYGGAT AAKYVRVFSG 
GHVDVTLVEP NAAFVSCPLS NLVLSGDRDM ASITVPYDAL VERHGVRWVR DRASAIDPGA
KQVRLAGGGT LDYDRLILSP GIDFVPGAIP GLANAATAAQ APHAWKAGVQ TLALRHRLEA
MPNGGTVAIS IPLAPYRCPP APYERACLIA NWLQRAKPDS RVLILDANDD VTSKGALFKR
VWAERYPQHI EYRPQYNAVD IDATGRVLKF DVQDDVQADV VNLIPPQRAG AIAVQAGLAT
ANGRWCEVDF LSFESKVAPG VHVIGDAIQT APLMPKSGHM ANQHGKVAAA AVVAMLAGHA
PDASPLYTNT CYSFATPDEA MHVATVHRYD ATEHTMVTVP GAGGLSDVPS AAEGKLAQGW
SRAIWSDMLG