Gene Rpic_3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3457 
Symbol 
ID6287021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3617027 
End bp3617497 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content67% 
IMG OID642627042 
Producthypothetical protein 
Protein accessionYP_001901009 
Protein GI187930522 
COG category[S] Function unknown 
COG ID[COG5501] Predicted secreted protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CAATCAACCT GGGCCGCCGC GACGTGCTGC GCGCCGGCGC CATGATGGCA 
CTGCTGGTGT CCGCCGGCAT TGCCACGCCG GCCCAGGCGG CCGAGTGGAA CAAGGCCGCC
TTTGCCGTGA AGGGCGTGAA CGACGTGCTC AAGCAACTGG GCGGTGGCGC GGTGGAGAAG
GGCGGCGCCG GCATCCAGCT CACCGCACCG GACATTGCTG AGAACGGCGC CGTGGTGCCA
CTGGTCGTGA CCAGCACGCT GCCCGGCACC GACCTTATCG CCATCCTGGT CGAAAAGAAC
CCGAACACGC TGGCCGCAAC GTTCGCCATT CCGGCCGGCA CCGACCCGTT TGTGAGCACG
CGCGTGAAGA TGGGCGAGAC CTCAACGGTC TACGCCGCCG TGCGCGCCAA CGGCAAATGG
GTGCTGGCGA GCAAGGAAGT GAAGGTCACC CTTGGTGGCT GCGGCGGTTA A
 
Protein sequence
MNDAINLGRR DVLRAGAMMA LLVSAGIATP AQAAEWNKAA FAVKGVNDVL KQLGGGAVEK 
GGAGIQLTAP DIAENGAVVP LVVTSTLPGT DLIAILVEKN PNTLAATFAI PAGTDPFVST
RVKMGETSTV YAAVRANGKW VLASKEVKVT LGGCGG