Gene Rpic_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3452 
Symbol 
ID6286848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3614203 
End bp3614700 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content68% 
IMG OID642627037 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001901004 
Protein GI187930517 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACGC TTCGACGGTT CCTGATGTGG ACGGCGGCAA TGGTGCTCGT TGCCAGCACC 
GCGCAGGCCG TCGAAGTGGG CGACGTGGCG GCGCTGCCCG ACGTGCAGCT GCTCGACGGC
ACGCGCGTGC CGGGCGATGC GTGGCGCGGG CACCCCGTCA TCATCGCCAC GTGGGCATCG
TGGTGCCCGT TCTGCGCGCT GCAGAATCCG CGCCTGCAAA AGCTGTATGA CGCCACGCGC
GGCACGGACC TGCGCATCCT CACCATCAGC ATCGACGCCA ACCCGCAGCT TGCGAAGGAC
TACGTCGCCA AGCGCGGCTT CACCTTTCCG GTGACGATGG AAACCGACGC GCTGTGCGCC
GCCACCGGCC CGCGCAAGGG CCTGCCCGAA CTGCTCGTGC TCGACGCCAA GGGCCGCGTG
GTGCGCAAGG AAGTCGGCGA GATGCTGGAA GACGACGTGG CCGACCTCGC ACGCTACGCA
CACAACCCCA AGCAATGA
 
Protein sequence
MRTLRRFLMW TAAMVLVAST AQAVEVGDVA ALPDVQLLDG TRVPGDAWRG HPVIIATWAS 
WCPFCALQNP RLQKLYDATR GTDLRILTIS IDANPQLAKD YVAKRGFTFP VTMETDALCA
ATGPRKGLPE LLVLDAKGRV VRKEVGEMLE DDVADLARYA HNPKQ