Gene Rpic_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3428 
Symbol 
ID6287976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3595238 
End bp3595555 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content61% 
IMG OID642627013 
Productchaperonin Cpn10 
Protein accessionYP_001900981 
Protein GI187930494 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTC GTCCCCTCTA CGACCGGGTT ATCGTCAAGC GAATCGAACA GCAACGGACG 
ACGGCCTCGG GCATCGTGAT TCCTGATTCC GCCGCAGAAA AACCCGAGCA AGGTGAAGTC
ATTGCGGTCG GCACGGGCCG CCTGCTTCAG GACGGCACGC AGCGCGAACT CCAATTGAAG
GTCGGTGACC AGGTGCTGTT CGGCAAGTAC GCCGGGCAGA CCGTCAAGGT CGATGGCGAG
GAACTCCTCG TCATGCGTGA AGAAGACGTC ATGGGCGTCA TCGAAACCCA CGCCGAGGCG
GTTGCCAAGG CCGCCTGA
 
Protein sequence
MKIRPLYDRV IVKRIEQQRT TASGIVIPDS AAEKPEQGEV IAVGTGRLLQ DGTQRELQLK 
VGDQVLFGKY AGQTVKVDGE ELLVMREEDV MGVIETHAEA VAKAA