| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3416 |
|---|
| Symbol | |
|---|
| ID | 6288873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 3583157 |
|---|
| End bp | 3583645 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642627001 |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | YP_001900969 |
|---|
| Protein GI | 187930482 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.765754 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCG ACGTACAGAC ACCTGAGGCC GCCGACACCA GCACCAGTGA AGGCGCCTAC
CAGCTTGACA CCATGGACCG CGATACCAAC ATCGGTAGGC TCGTGCACCG GGTCCGACAC
GCGTTGGTGA CGCATATCGA CAGTGCCCTG GCATCGCTGG ACTTGACAGC CGCGCAATGG
ACGGTCGTCA TCTACCTGGC CGAAGACCTG GCCACCACGC CGGCCGAACT CTCGCGCCTG
CTGCACTACG ATCCGGGCGC GATGACGCGG CTGATCGATC GGCTGGAGAA GAAGAACATC
GTCAAGCGCG CGCCCAGCGA TGCGGACCGC CGCTCGGTGG TGGTCTCGCT CACCGAGCAG
GGCCGCGCGC TCTATCCGGA AATCCGGCCG CTAATCATCG ACGTGCTGAA CCACCTGCTG
CGCGGGTTTT CGCAAACCGA GGTCAAGCAG TTGGAAAACC TGCTGTTGCG CGTGCTGCAC
AACGCCTGA
|
|---|
| Protein sequence | MSIDVQTPEA ADTSTSEGAY QLDTMDRDTN IGRLVHRVRH ALVTHIDSAL ASLDLTAAQW
TVVIYLAEDL ATTPAELSRL LHYDPGAMTR LIDRLEKKNI VKRAPSDADR RSVVVSLTEQ
GRALYPEIRP LIIDVLNHLL RGFSQTEVKQ LENLLLRVLH NA
|
|---|
| |