Gene Rpic_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3416 
Symbol 
ID6288873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3583157 
End bp3583645 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID642627001 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001900969 
Protein GI187930482 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.765754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG ACGTACAGAC ACCTGAGGCC GCCGACACCA GCACCAGTGA AGGCGCCTAC 
CAGCTTGACA CCATGGACCG CGATACCAAC ATCGGTAGGC TCGTGCACCG GGTCCGACAC
GCGTTGGTGA CGCATATCGA CAGTGCCCTG GCATCGCTGG ACTTGACAGC CGCGCAATGG
ACGGTCGTCA TCTACCTGGC CGAAGACCTG GCCACCACGC CGGCCGAACT CTCGCGCCTG
CTGCACTACG ATCCGGGCGC GATGACGCGG CTGATCGATC GGCTGGAGAA GAAGAACATC
GTCAAGCGCG CGCCCAGCGA TGCGGACCGC CGCTCGGTGG TGGTCTCGCT CACCGAGCAG
GGCCGCGCGC TCTATCCGGA AATCCGGCCG CTAATCATCG ACGTGCTGAA CCACCTGCTG
CGCGGGTTTT CGCAAACCGA GGTCAAGCAG TTGGAAAACC TGCTGTTGCG CGTGCTGCAC
AACGCCTGA
 
Protein sequence
MSIDVQTPEA ADTSTSEGAY QLDTMDRDTN IGRLVHRVRH ALVTHIDSAL ASLDLTAAQW 
TVVIYLAEDL ATTPAELSRL LHYDPGAMTR LIDRLEKKNI VKRAPSDADR RSVVVSLTEQ
GRALYPEIRP LIIDVLNHLL RGFSQTEVKQ LENLLLRVLH NA