| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3410 |
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| Symbol | |
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| ID | 6287990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3574372 |
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| End bp | 3575532 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642626995 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001900963 |
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| Protein GI | 187930476 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.670382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA AGCTGTTTGC GGCCGCTGCT GCCGCCCTGG TTTCGGCTGG CGCCTTCGCT
CAATCGAGCG TGACGATGTA CGGTGTGGTC GATGCCGGCG TTGAGTGGGT CAACAAGGCG
CCGAATGCTG CTCGCACGGA AGGCAACTCC CGCGTCGGCA TGCAGTCGGG CAACATGTCC
GGCTCGCGTT GGGGTCTGCG CGGCGTTGAA GACCTGGGCG GTGGCCTGAA GGGCGTCTTC
AACCTGGAAA GCGGCTTCGA CATCGACGAC GGCCGTTCGG CGCAAGGTAA CCGCCTGTTC
GGTCGCGCTG CCTACGTCGG ACTGCAGGGC CAGTGGGGCC AACTGACCTT GGGCCGCCAG
CAGAACCTGC TGTACGACTT CGCGCTGCAA TACGACCCGA TGGCGATCGC CTCGCGCTAT
TCAATCGCTT CGCAAGATGC CTACTTGGCT GGCCGTGCTG ATAACGCGGT CAAGTACGTC
GGTACCTTCG GCGGCCTGAC GGCATCGGCG CTATACGCGT TCAATCGTGA CGGCAACGAG
CAAGCTGGCA TGACGAAATT GGGCCGTGAG TGGAGCGCCG GCCTGAACTA TGCCACCGGC
CCGTTCGCGG TCGGTGCGGT GTATGACCAG TCGAATGGCG CTAGCAATGC CTTCTTCACC
AACGGTTTCA TGGCGGACCT GAAGGAGCAG CGTGCCACCA TCGGTGGAAC CTACGCTGTC
GGCCCTGCCA AGTTTTATGC AGGCTACCGC TGGTACAAGA TGAGCCATGA CCTGGGCTCG
ACCGGTGTCA ATGGCGACCT GCGTTCGAAC CTGTACTGGC TTGGCGCCGG CTATCAAGCG
ACGCCCGCGC TGACGCTGAC CGGTACCGCC TACTACCAGA CATTCAAGAA CGGCGAATTG
CTGGGTGCTC TGGCGAGCAA CGATGCGAAT ACCAACGTCG GCAATCCTTG GCTGTTCGTG
GTCGGGGCTG ACTATGCCTT GTCCAAGCGC ACCGATGCGT ACATGAACGT GGCCTATGCC
AAGAACAGCC GCAGCTCGAT TCTGGGCGTC GCGGGCATCA ATGGCACCTC GTCGAATCTT
TCGACGCTGC AATCGAACCA GAACCAAGTG TTCGATGGCA ACCAACTGGG CGCCGTGGTC
GGTATCCGCC ACAAGTTCTA A
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| Protein sequence | MKIKLFAAAA AALVSAGAFA QSSVTMYGVV DAGVEWVNKA PNAARTEGNS RVGMQSGNMS
GSRWGLRGVE DLGGGLKGVF NLESGFDIDD GRSAQGNRLF GRAAYVGLQG QWGQLTLGRQ
QNLLYDFALQ YDPMAIASRY SIASQDAYLA GRADNAVKYV GTFGGLTASA LYAFNRDGNE
QAGMTKLGRE WSAGLNYATG PFAVGAVYDQ SNGASNAFFT NGFMADLKEQ RATIGGTYAV
GPAKFYAGYR WYKMSHDLGS TGVNGDLRSN LYWLGAGYQA TPALTLTGTA YYQTFKNGEL
LGALASNDAN TNVGNPWLFV VGADYALSKR TDAYMNVAYA KNSRSSILGV AGINGTSSNL
STLQSNQNQV FDGNQLGAVV GIRHKF
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