| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3406 |
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| Symbol | |
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| ID | 6289647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3570754 |
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| End bp | 3571749 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642626991 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001900959 |
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| Protein GI | 187930472 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.149458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCC TTTTCTTCAG CAGCCACCGT TACGACGAAG ACAGCTTCCG CGCCTCACTC
GCGCGCGGCG GCCACAGCTT CGACCTTGTC TTCCAGCGTG CGCACCTCGA CGCGCAAACG
GCGTCTCTTG CCGCCGGCTT TGAGGTGGTG TGCCCGTTCG TGAATGATTC CCTCAGCGCG
GAAGTGCTCG AAGCGCTGGC TGCGGGCGGC ACGCGGCTGA TCGCGCTGCG CTCGGCGGGT
TTCAACCACG TCGATCTGCC GGCCGCCCAG CGTCTGGGGC TGACGGTGGT GCGCGTGCCG
GCGTATTCGC CACACGCGGT GGCCGAGCAT GCGGTCGGCA TGATTCTCAC GCTCAACCGG
CGGCTGCACC GCGCCTGCAA TCGCACGCGC GAAGGCGACT TCTCGCTGGA TGGATTGCTC
GGCTTCGACC TCGCGGGCAA GATCGTCGGC GTGATCGGCA CCGGGCAGAT TGGACAGGTG
TTCGCGCGCA TCATGGCCGG CTTCGGCTGC CAGTTGCTGG CATTCGATCC GTTTCCGCAA
GCCTCGCTGG CGCCCCTGGG CGTGCGTTAC GTACCGCTAC CGGAATTGCT GGCGCAGGCC
GATATCGTCA GCCTGCACTG TCCGCTCAAC GCTGGCACAC ATCACCTGAT CGACGCCAGC
GCTCTGGCCA GCATGAAGCC GGGCGCGATG CTCATCAACA CGAGCCGCGG CGGCCTGGTC
GACAGCCCCG CGCTGATCGA CGCCCTCAAG ACCGGCCAGC TCGGCCACCT CGGGCTGGAT
GTCTACGAAG AAGAGGCCGA TCTGTTCTTC GAAGACCGCT CCGCCGACGT GCTGCAGGAC
GACGTGCTGG CGCGCCTGCT GAGCTTTCCC AACGTCATCG TCACCGCGCA TCAGGCGTTT
TTCACGCGCG AGGCGCTGGC GGGCATTGCC GACACCACGC TCGCCAACGT GGCGGCGTGG
GCGGCAGGTG CACCCGTCAA TGTGGTGAAG GCTTAG
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| Protein sequence | MRILFFSSHR YDEDSFRASL ARGGHSFDLV FQRAHLDAQT ASLAAGFEVV CPFVNDSLSA
EVLEALAAGG TRLIALRSAG FNHVDLPAAQ RLGLTVVRVP AYSPHAVAEH AVGMILTLNR
RLHRACNRTR EGDFSLDGLL GFDLAGKIVG VIGTGQIGQV FARIMAGFGC QLLAFDPFPQ
ASLAPLGVRY VPLPELLAQA DIVSLHCPLN AGTHHLIDAS ALASMKPGAM LINTSRGGLV
DSPALIDALK TGQLGHLGLD VYEEEADLFF EDRSADVLQD DVLARLLSFP NVIVTAHQAF
FTREALAGIA DTTLANVAAW AAGAPVNVVK A
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