| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3404 |
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| Symbol | |
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| ID | 6289645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3565534 |
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| End bp | 3569094 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642626989 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_001900957 |
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| Protein GI | 187930470 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.206318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCC CTCTGAACGA CGCGCTACGA CGCGCGCTCG AAACCGTTTC CCTGGACGAC
AAGTACACGC TCGAGCGTGG CCGCATCTAC ATCAGCGGCA CGCAGGCACT GGTGCGTCTG
CCAATGCTGC AGCAGGAGCG TGACCGCGCC GCTGGGCTGA ATACTGCGGG CTTCATTTCC
GGCTACCGCG GCTCGCCGCT GGGGGCGCTG GACCAGGCGC TGTGGAAGGC CAAGAAGCAT
CTGGCCGGGC ACAACATCGT CTTCCAGGCG GGGCTCAACG AAGACCTGGC CGCCACGGCG
GTCTGGGGCT CGCAGCAGGT CAATCTGTAT CCGAGCGCCA AGTTCAGCGG CGTGTTCGGC
ATGTGGTACG GCAAGGGGCC GGGCGTGGAC CGCACGATCG ACGTGTTCAA GCACGCCAAC
TCGGCCGGTT CGTCGGCGCA TGGCGGGGTG CTGGTGCTGG CCGGTGACGA TCACGCAGCC
AAGTCCTCCA CGCTGGCGCA CCAGTCTGAG CACGTCTTCA AGGCGGCCGG CATTCCGGTG
CTGTATCCGT CCAACGTGCA GGAATATCTC GACTACGGCC TGCACGGCTG GGCGATGAGC
CGCTACTCCG GCCTGTGGGT GTCGATGAAG TGCGTGACGG ACGTGGTGGA ATCGTCCGCC
TCGGTGGACG TCGATCCGCA TCGCGCGCAG ATCATCCTGC CCGAAGATTT CGCCATGCCG
CAGGGCGGCC TGAACATCCG CTGGCCCGAT CCGCCGCTGG TGCAGGAAGC CCGCCTGCTC
GACTACAAGT GGTACGCCGG CCTGTCGTAC GTGCGGGCCA ACAAGCTCGA CCGCGTGGTG
CTCGATTCGC CGCAGGCGCG CTTCGGCATC ATGACCGCCG GCAAGGCGTA CCTCGACGTA
CGTCAAGCGC TGGTCGACCT CGGCCTTGAT GAGGACACCT GCCGCCGCAT CGGCATTCGC
CTGTACAAGG TCGGCTGTGT ATGGCCGCTG GAAGCACACG GCGCGCGCGC CTTTGCCGAG
GGCCTGCAAG AGATCCTGGT GGTGGAAGAG AAGCGCCAGA TCCTCGAATA CCAACTCAAG
GAAGAGCTGT ACAACTACCG CGACGACGTG CGTCCGCGCG TGTACGGCAA GTTTGACGAA
AAGGACAACG CCGGCGGCGA ATGGTCGGTG CCGATGGCCA ATTGGCTGCT GCCGGCGCAT
TACGAGCTGT CGCCTGCCCT GATCGCCCGC GCCATCGCCA CGCGTCTGGA AAAGTTCGAG
TTGCCGTCAG ACGTGCGCGC GCGCATTGCC TCGCGCATCG CCATCATCGA CGCCAAGGAG
AAGGCGCTCG CCCGCCCGCG CGTCACCGCC GAGCGCAAGC CGTGGTTCTG CTCGGGTTGT
CCGCACAACA CGTCGACCAA CGTGCCGGAA GGCTCGCGCG CGCTGGCCGG CATCGGCTGC
CACTACATGA CCGTGTGGAT GGATCGCCGC ACCGACACCT TCAGCCAGAT GGGCGGCGAA
GGTGTGGCGT GGATCGGCCA GATGCCGTTT TCGGGCGACC AGCACGTGTT CGCCAACCTC
GGCGACGGCA CGTATTACCA CTCGGGCCTG CTGGCGATTC GCGCGTCGAT TGCAGCCAAG
GTGAACATCA CCTACAAGAT CCTCTACAAC GACGCCGTGG CCATGACGGG CGGCCAGCCG
GTCGACGGCC CGCTCTCCGT GCCGCAGATT GCCGCGCAGG TGCATGCCGA AGGGACGTCG
CGCATCGTCA TCGTCACGGA CGAGCCCGAG AAGTACAACG CCGCCATCAA GCTGCCCGAA
GGTGTGACGG TGCATCACCG CGACCGTCTC GACGCCATCC AGCGCGAGCT GCGCGAGGTG
CAAGGCACCA GCGTGCTGAT CTACGACCAG ACCTGCGCGA CTGAGAAGCG CCGCCGCCGC
AAGCGCGGCA CGCTGGTCGA TCCGGCACGC CGCGCGTTCA TCAACGACGC GGTGTGCGAA
GGCTGCGGCG ATTGCTCGGT CAAGTCGAAC TGCCTGTCGG TCGAGCCGCT GGAAACGGAG
CTGGGCACCA AGCGCAAGAT CAACCAGTCG TCCTGCAATA AGGACTTTTC TTGCGTGAAC
GGCTTCTGCC CGAGCTTCGT GACGGCCGAG GGCGCGCAGG TGCGCAAGCC GGAATCGCAC
GGCGTGTCGA TGGAAGGCCT GCCGCTGCTG CCGCATCCTG AGCTGCCCGC CATCCAGCGC
GCGTACGGCG TGCTGGTGAC TGGCGTGGGC GGCACGGGCG TGGTGACGAT CGGCGGCCTG
CTCGGCATGG CCGCGCACAT CGAAGGCAAG GGCGTGACCG TGCTCGACAT GGCGGGCCTG
GCGCAGAAAG GTGGCGCCGT GCTCTCGCAC GTGCAGATCG GCGAGCGTCC GGATTCGATC
CACGCCACGC GCATCGCCAT GGGCGAGGCG GATCTGGTGA TCGGCTGTGA CGCGATTGTC
TCGGCGTCTG ACGAAGTGCT GTCGAAGGTG CAGCACGGCC AGACGCGCGC GATCGTCAAC
AGCACCGCAT CGCCCACCGC CGACTTCATC AAGAACCCGA ACTGGCGCTT CCCGGGCAGC
TCGACCGAAG CGGACATCCG TGCGGCCATC GGCGATGCCT GCGCGTTTGA AGACGCCAGC
ACGCTGGCCG TGCGCCTGCT GGGCGACGCC ATCTACACCA ACCCCCTGGT GCTGGGTTTT
GCGTGGCAGA AAGGCTGGCT TCCGCTGACA CACGACGCGC TCGTCCGCGC GATCGAACTC
AACGGCGTGG CCGTCGAGAA GAACAAGACC GCGTTCGAAT GGGGCCGCCA CCTCGCGCAA
GACCGCGATG CGGTGCTCAA GCTCGCCGAC GACGCCCCGC GTGCCAAAGC GGATGTGATT
GCGCTGCCCT CGCTGGACAC GCTGATCGCC CGCCGCGTCG ATCTGCTGAC CGCCTACCAG
AACGCCGCGT ATGCCGCCGA ATTCCGCGCT GTGGTCGAAC GGGTGCGCGC GGCGGAAGCA
GCCGTGGTCG GTGCAGGCCA GGCGCTGGCG CTGACGGAAG CCGTGGTGCG CAATCTGTCG
AAGCTGATGG CGTACAAGGA CGAATACGAA GTCGCCCGCC TGTACACCGA TCCGGCATTC
CTCGACAAAC TGCGCGCGCA GTTCGAAGGC GAACCGGGGC GCGACTACCA GCTCAACTTC
TGGCTCGCGC CGCCCATGAT GGCCAAGCGC GACGAGAAGG GGCACCTGGT CAAGCAGCGC
TTTGGCCCCA ACACGATGCG CATCTTCAAG GTGCTCGCCA AGCTCAAGGG CCTGCGCGGC
ACGGCGTTCG ACATCTTCGG CAAGACTGAA GAGCGCCGCA CCGAGCGCGC GCTGATCGGC
GAATACCGTG CTCTGATCGA TGAACTGGTG AAGAGCCTGA CGGCGCAGAA GCTGGCGCAG
GCCGTGGAAC TGGCCCGCCT GCCGGAAGAC ATCCGCGGCT TCGGCCATGT GAAGGAGGCC
AACCTGGCCG CGGCGCGCAT CCGCTGGAAC AAGCTGCTCG CGCAGTGGCG CGATCCGGCT
GCGGCACAGC AGGCAGCCTG A
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| Protein sequence | MNAPLNDALR RALETVSLDD KYTLERGRIY ISGTQALVRL PMLQQERDRA AGLNTAGFIS
GYRGSPLGAL DQALWKAKKH LAGHNIVFQA GLNEDLAATA VWGSQQVNLY PSAKFSGVFG
MWYGKGPGVD RTIDVFKHAN SAGSSAHGGV LVLAGDDHAA KSSTLAHQSE HVFKAAGIPV
LYPSNVQEYL DYGLHGWAMS RYSGLWVSMK CVTDVVESSA SVDVDPHRAQ IILPEDFAMP
QGGLNIRWPD PPLVQEARLL DYKWYAGLSY VRANKLDRVV LDSPQARFGI MTAGKAYLDV
RQALVDLGLD EDTCRRIGIR LYKVGCVWPL EAHGARAFAE GLQEILVVEE KRQILEYQLK
EELYNYRDDV RPRVYGKFDE KDNAGGEWSV PMANWLLPAH YELSPALIAR AIATRLEKFE
LPSDVRARIA SRIAIIDAKE KALARPRVTA ERKPWFCSGC PHNTSTNVPE GSRALAGIGC
HYMTVWMDRR TDTFSQMGGE GVAWIGQMPF SGDQHVFANL GDGTYYHSGL LAIRASIAAK
VNITYKILYN DAVAMTGGQP VDGPLSVPQI AAQVHAEGTS RIVIVTDEPE KYNAAIKLPE
GVTVHHRDRL DAIQRELREV QGTSVLIYDQ TCATEKRRRR KRGTLVDPAR RAFINDAVCE
GCGDCSVKSN CLSVEPLETE LGTKRKINQS SCNKDFSCVN GFCPSFVTAE GAQVRKPESH
GVSMEGLPLL PHPELPAIQR AYGVLVTGVG GTGVVTIGGL LGMAAHIEGK GVTVLDMAGL
AQKGGAVLSH VQIGERPDSI HATRIAMGEA DLVIGCDAIV SASDEVLSKV QHGQTRAIVN
STASPTADFI KNPNWRFPGS STEADIRAAI GDACAFEDAS TLAVRLLGDA IYTNPLVLGF
AWQKGWLPLT HDALVRAIEL NGVAVEKNKT AFEWGRHLAQ DRDAVLKLAD DAPRAKADVI
ALPSLDTLIA RRVDLLTAYQ NAAYAAEFRA VVERVRAAEA AVVGAGQALA LTEAVVRNLS
KLMAYKDEYE VARLYTDPAF LDKLRAQFEG EPGRDYQLNF WLAPPMMAKR DEKGHLVKQR
FGPNTMRIFK VLAKLKGLRG TAFDIFGKTE ERRTERALIG EYRALIDELV KSLTAQKLAQ
AVELARLPED IRGFGHVKEA NLAAARIRWN KLLAQWRDPA AAQQAA
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