| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3401 |
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| Symbol | |
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| ID | 6286492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3561197 |
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| End bp | 3562408 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642626986 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001900954 |
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| Protein GI | 187930467 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.54461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCT TCCGCTACGA AGCCGCCGAC GCCACCGGCA AGACCGACAA GGGTGTCATC
GAAGCCGACA GCGCACGCCA GGCGCGCACG CTGCTGCGCG CACGCGGGCT GACGCCGCTG
CTGGTCGACG CGCTGGGCGC GCAGGCCACG AAGCGCAGCG GGTCCACCTT CGGCAAGCGG
CTATCGGCGC AGGAAAACGC GCTCGTCACG CGCCAGCTCG CCAGCCTGCT GGTGGCGGGC
CTGCCGCTCG ATGAGGCGCT GGCCGCGCTG GCTGATCAGG CCGAACGCGC GTACGTCGGT
GAACTGCTCG CCGCCATCCG CGCGGAAGTG CTGGGCGGCA GCTCGTTGTC GGTGGCGCTG
GCGCAGCATC CGAAGGATTT TCCCGACATC TACCGTGCCC TCGTATCAGC GGGGGAGCAC
TCGGGCAACC TCGGGCTCGT GCTGTCACGC CTGGCCGACT ACATCGAAAG CCGCAACGCG
CTCACATCGA AGATCAAGCT GGCCTTCACG TACCCCGCCA TCGTCACGGT GGTGGCGTTT
GCGATTGTGA TCTTTCTGCT GTCGTACGTG GTGCCGCAGG TGGTCAGCGT GTTTGCCAAC
ACCAAGCAGA AGCTGCCGAC GCTCACGATC ATCATGCTGT GGCTGTCGGA CTTTGTGCGG
AACTGGGGCT GGCTGGCGGC GATCGTGCTG GTGGCGATCG GCGTGCTGAT CCGCAATCTG
CTCAAACAGC CGGCGTTGCG GTTGTCGTGG CACAAGTGGC TGCTGACTGC GCCGCTGTTC
GGCAAGCTCG TTCGCGGCTA CAACACCGCG CGGTTTGCGA GCACGCTGGC GATTCTGACC
AGTGCCGGTG TGCCGATTCT GCGTGGGTTG CAGGCAGCGG GTGAGACGCT GAACAACGTT
GCGCTGAAGA CCAATGTTGA AGATGCGTCC ACGCGCGTGC GCGAAGGGAC TTCGCTGGCG
CGGGCGTTGG CGGCGCAGAA CCAGTTTCCG CCTGTGCTGG TGCACCTGAT CCGCTCGGGT
GAGGCGACGG GGAATCTGCC TGCGATGTTG GAGCGGGCTG CGCAAGGAGA AGCGCAAGAA
CTGGAGCGTC GGACGTTGTT CCTTACTGGC TTGCTGGAGC CGGCGCTGAT TTTGACGATG
GGTGTGGTGG TGTTGCTGAT TGTGTTGGCG GTGTTGATGC CGATTATCGA GATTAATCAG
TTGGTGCACT GA
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| Protein sequence | MPAFRYEAAD ATGKTDKGVI EADSARQART LLRARGLTPL LVDALGAQAT KRSGSTFGKR
LSAQENALVT RQLASLLVAG LPLDEALAAL ADQAERAYVG ELLAAIRAEV LGGSSLSVAL
AQHPKDFPDI YRALVSAGEH SGNLGLVLSR LADYIESRNA LTSKIKLAFT YPAIVTVVAF
AIVIFLLSYV VPQVVSVFAN TKQKLPTLTI IMLWLSDFVR NWGWLAAIVL VAIGVLIRNL
LKQPALRLSW HKWLLTAPLF GKLVRGYNTA RFASTLAILT SAGVPILRGL QAAGETLNNV
ALKTNVEDAS TRVREGTSLA RALAAQNQFP PVLVHLIRSG EATGNLPAML ERAAQGEAQE
LERRTLFLTG LLEPALILTM GVVVLLIVLA VLMPIIEINQ LVH
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