Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3397 |
Symbol | |
ID | 6289529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3555711 |
End bp | 3556280 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642626982 |
Product | General secretion pathway M protein |
Protein accession | YP_001900950 |
Protein GI | 187930463 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3149] Type II secretory pathway, component PulM |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACTT CCTCCCCCTC TTCTTCCCGA CCGGCATCCC GCCGCCTGCC GCGCATTGGC GTGCCGGACT CGGTGCGCGA CGCGGCCACG ACGTTCTGGA TGCAGCGCGA ACCGCGCGAA CGCCGCATCC TGGCCGGTGG CGGCGTGGTG CTGCTGTTGG TGATCGTCTA CCTCGTGCTG TGGGAGCCGG CCTTCGAAGG CCAGCGCCGC ATCGAGAAAG CCCTGCCGCA AATGCGCAGC CAACTCGCCG AGATGGAAAC GCTGGGCCAG GAAGCGCGCG GCCTGTCTGC CATTGCCGCC GCGCCGGTGC CGCGCGGTGC GGAATTGCAG CAGGCGCTCA ACACGAGCCT CACCAACCAC GGCCTGAAGG CCACGCGCAT GGCGATGTCG GGCGAGAGCG TGCAGGTGCA ACTGGACAAG GTGCCCTTTG GCGCTGTCGC CGAATGGCTG CAGGAGGTGC GGCAGGCCCA GCGCATGAAG GTGATCGACA CGAACATCAA GTACGTGGGC GCGACGGCCC TGGTCAACGT GACGGCGACG CTGCAAGGCC CCGCCGCCAC AGGCCGCTGA
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Protein sequence | MATSSPSSSR PASRRLPRIG VPDSVRDAAT TFWMQREPRE RRILAGGGVV LLLVIVYLVL WEPAFEGQRR IEKALPQMRS QLAEMETLGQ EARGLSAIAA APVPRGAELQ QALNTSLTNH GLKATRMAMS GESVQVQLDK VPFGAVAEWL QEVRQAQRMK VIDTNIKYVG ATALVNVTAT LQGPAATGR
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