Gene Rpic_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3395 
Symbol 
ID6289527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3553020 
End bp3554108 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID642626980 
ProductGeneral secretion pathway protein K 
Protein accessionYP_001900948 
Protein GI187930461 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGAT GCTCCCGTCG ATTGTCTCAA CGTCATCCGC AGCCCGGGCG CCAGCGCGGC 
GCGGCCATCA TTACAGCGCT GCTCGTCGTT ACGCTGGCCG TGGTGATCGT GTCGGGCATG
CTGTGGCGCC AGCAGGTGGA GATCCGCGCG GTGGAAAACC AGCGCCTGAA ATCGCAGGCC
ACGTGGATCG CGCGGGCGGG CATCGACTGG GCGCGCCTCA TCCTGCGCGA CGACCAGCGC
CGCACCGGGG CGGTAGACCA CCTGGGCGAA ATCTGGGCCG TGCCGATCCA GGAAACCAAG
CTGTCGGACT TTCTCGGCAG CTCGCTGCGC ACGGACACGG CCGGCGAAGA GTCCTACCTG
TCGGGCCGGA TCTTCGATGC CCAGGCGCGC TTCAACCTGA TGAACCTGCT GATAGCGCGG
ACGCTGGGCG GCCGCATGAT CATTACCGGC CGCGACAAGA ACGCCATCAA GGCGTACGGC
CTGCTGCTGC AGTCGCTCAA CATCGACCCG AGCCTGGCCA ATGTCACGGC GACGTACCTG
GCGCAGATGT TGGGCGGCTT CCAGTCGATC GAAGGCATGC AGGGCGGTCA GCAAGGCGGC
GAAGACAGCG GCGGGGGCGG GAGCGGCGGC AGCAACAGCA GCGGCCCGCG ACCGCTCGAC
GACGTGGCCA GCCTGCTGAC GATCCCGGGC TACACGGCGG ACATGGTCGC CAAGCTGCGC
CCCTACGTGA TCGTGCTCCC CACCCGCACG CAGATCAACG CCAACACGGC CAGCGCCGAA
GTGCTGGCCG CCGTCATCCC GAACCTGAGC CTGGACCGCG CCCGCTCGCT GGTGCAGGCG
CGCGACCGCG CGTACTTCCG CAACATCGGC GACGTCACCA ACCAGTTGCG CGGCATCGCG
CCGGGGGTTG ACACCACCGC AGCGGCCAAC CTGCTGGACG TGCAGACCCA CTATTTCCTC
GTCTACGGCA TGGCCCGCCA CGAGCGCGCC CGGATCGGGG AAGTGGCGCT TGTTTCACGT
GGCGATCCGA TCAACAATAA CGCGACCCGC ATCGTGTGGG TCCGCCGCAT TGACGAGATT
CCGTCATGA
 
Protein sequence
MARCSRRLSQ RHPQPGRQRG AAIITALLVV TLAVVIVSGM LWRQQVEIRA VENQRLKSQA 
TWIARAGIDW ARLILRDDQR RTGAVDHLGE IWAVPIQETK LSDFLGSSLR TDTAGEESYL
SGRIFDAQAR FNLMNLLIAR TLGGRMIITG RDKNAIKAYG LLLQSLNIDP SLANVTATYL
AQMLGGFQSI EGMQGGQQGG EDSGGGGSGG SNSSGPRPLD DVASLLTIPG YTADMVAKLR
PYVIVLPTRT QINANTASAE VLAAVIPNLS LDRARSLVQA RDRAYFRNIG DVTNQLRGIA
PGVDTTAAAN LLDVQTHYFL VYGMARHERA RIGEVALVSR GDPINNNATR IVWVRRIDEI
PS