Gene Rpic_3393 details

Gene Information

• Locus tag: Rpic_3393
• ID: 6287545
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12J
• Kingdom: Bacteria
• Replicon accession: NC_010682
• Strand: +
• Start bp: 3551887
• End bp: 3552285
• Gene Length: 399 bp
• Protein Length: 132 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642626978
• Product: general secretion pathway protein I
• Protein accession: YP_001900946
• Protein GI: 187930459
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01707] general secretion pathway protein I; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 37
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGCGCA GCCATCGTCC CACGCGCACG CGCGGCTTCA CCCTGCTCGA AGTCCTGGTG 
GCGCTGACCA TCGTGGCCGT GGCGCTCACC GCCACCATGC GCGCCATGGG CAGCATGACC 
ACCGCCAGCG ATTCGCTGCA GACGCGCATG ATCGCCACCT GGAGCGCCGA GAACCACCTG 
GCAAACCTGC GCCTCGCACG CGTCTTCCCA GACCCCGGCG CGCGCGGCTT CGCCTGCCCG 
CAGGGCGATA CCCAACTGTG GTGCGAAGAG ACCATCGCAA CCACGCCCAA TCCAGTGTTC 
CGTCGCGTGG AGGTCGCCGT CTATCCGGAT GCGTCCAAAT CCGTGCGACT GGCGTGGCTC 
GTGACTCTGT TGCCGAACGA TGCGCGCAAT GTCTTCTAA 

 

Protein sequence

MTRSHRPTRT RGFTLLEVLV ALTIVAVALT ATMRAMGSMT TASDSLQTRM IATWSAENHL 
ANLRLARVFP DPGARGFACP QGDTQLWCEE TIATTPNPVF RRVEVAVYPD ASKSVRLAWL 
VTLLPNDARN VF