Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3392 |
Symbol | |
ID | 6287544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3551396 |
End bp | 3551890 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642626977 |
Product | general secretion pathway protein H |
Protein accession | YP_001900945 |
Protein GI | 187930458 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR01708] general secretion pathway protein H [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGCC AATCACGCCG CCACCAGCCC CCTCGCGGCT TTACGCTGCT GGAGTTGCTG GTGGTGGTGG TCATCATCGG CATCGTGCTG GCCGTGGTGG CCGTGAACGC CACGCCCAAC CCGCGCTCGC AACTGGTCGA TGACGCGCAA AAGCTCGCCC GCCTGATCGA ACTGGCTCAG GAAGAGGCGC AGCTCACGTC GCGCCCTGTG GCGTGGGAAG GCGATGCGCA GGGCTGGCGC TTCTACGAAT CGACCCCCAA CGGCTGGCGC CTGCTCACGC GCGACGTGCT CGCGCCGGGC CACTGGCGCC AAGGCATGGA CAACGTACAG ATCGTCGCCG GTGCCGCTGC GGTCCCGGGC GCACCGCAGC GCCTCGTGTT CGGCCGCGAG GCGATCGGCT TGCCGTGGCG CGTGGCGCTG ACCTCGCAAG GATCGCGCGT CGACGTGGTA TCCGACGGCG GCCCCCGCGT GCTGACGGAG ATGCAAACGC AATGA
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Protein sequence | MFGQSRRHQP PRGFTLLELL VVVVIIGIVL AVVAVNATPN PRSQLVDDAQ KLARLIELAQ EEAQLTSRPV AWEGDAQGWR FYESTPNGWR LLTRDVLAPG HWRQGMDNVQ IVAGAAAVPG APQRLVFGRE AIGLPWRVAL TSQGSRVDVV SDGGPRVLTE MQTQ
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