Gene Rpic_3392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3392 
Symbol 
ID6287544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3551396 
End bp3551890 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID642626977 
Productgeneral secretion pathway protein H 
Protein accessionYP_001900945 
Protein GI187930458 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGCC AATCACGCCG CCACCAGCCC CCTCGCGGCT TTACGCTGCT GGAGTTGCTG 
GTGGTGGTGG TCATCATCGG CATCGTGCTG GCCGTGGTGG CCGTGAACGC CACGCCCAAC
CCGCGCTCGC AACTGGTCGA TGACGCGCAA AAGCTCGCCC GCCTGATCGA ACTGGCTCAG
GAAGAGGCGC AGCTCACGTC GCGCCCTGTG GCGTGGGAAG GCGATGCGCA GGGCTGGCGC
TTCTACGAAT CGACCCCCAA CGGCTGGCGC CTGCTCACGC GCGACGTGCT CGCGCCGGGC
CACTGGCGCC AAGGCATGGA CAACGTACAG ATCGTCGCCG GTGCCGCTGC GGTCCCGGGC
GCACCGCAGC GCCTCGTGTT CGGCCGCGAG GCGATCGGCT TGCCGTGGCG CGTGGCGCTG
ACCTCGCAAG GATCGCGCGT CGACGTGGTA TCCGACGGCG GCCCCCGCGT GCTGACGGAG
ATGCAAACGC AATGA
 
Protein sequence
MFGQSRRHQP PRGFTLLELL VVVVIIGIVL AVVAVNATPN PRSQLVDDAQ KLARLIELAQ 
EEAQLTSRPV AWEGDAQGWR FYESTPNGWR LLTRDVLAPG HWRQGMDNVQ IVAGAAAVPG
APQRLVFGRE AIGLPWRVAL TSQGSRVDVV SDGGPRVLTE MQTQ