| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3390 |
|---|
| Symbol | |
|---|
| ID | 6288946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3550035 |
|---|
| End bp | 3550718 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642626975 |
|---|
| Product | putative general secretion pathway related transmembrane protein |
|---|
| Protein accession | YP_001900943 |
|---|
| Protein GI | 187930456 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTC GACAGTCGTC CCGCCTGCTC AGCCTTGTAC TGTTTGCTGC CCTGTGTGCG
CTGCTGACGC ACTGGGTGCT GACGCTGTCG TCGCTGCGCT CGCTGGGCGC GCCGCGTGAG
GCGCGCGTGG CGCAGACCGA TGCCCTGGAG ACCGGCGCCG CCGTCACGCT CTTCGGCGGT
GGCCCGCAGA ACGGTCCGCG CGATGTGCAG GTAATGGGCG TGGTGGCCGA TCTGGCAGAT
GGTTCCGGGG CAGCCATCGT GTCGGTGGAC GGTGGCGCAC CGCAGGCCGT GCGCGCCGGC
AAGTCGTTGT CGTCCAATAT CAAGCTGGTG GAAATCAAGG CACGCTCGGT GGTGATCGAG
CGCAACGGCG CGCGCCAGGA GATTCCGCTG CCGGCGAGCG CCTTGGGGGG GGGGGCGCCG
GCCAATCGCA ATGCACCGGC GATGCCGCTG CCGCCTGCAG GCGCCGCAGC TCCGCTATCG
ACGCCCGCCA TGCCACCAGC GCCGCCGGTT GCCAACAATC CGGCCAATAC CTCCATGCCG
GGCGCCATGC TGCCCATTGC ACCAGCGCAG ATCAACACGG GTGAGGAGCC TACGAGCCAG
GGCGGCGGCA TTGTCGGCCC TCGCCACCGC GCAGCGGCCG CCGCACGCAA GGGCGACACC
CCCCAGCCGG GCGCCGACCA ATAG
|
|---|
| Protein sequence | MNARQSSRLL SLVLFAALCA LLTHWVLTLS SLRSLGAPRE ARVAQTDALE TGAAVTLFGG
GPQNGPRDVQ VMGVVADLAD GSGAAIVSVD GGAPQAVRAG KSLSSNIKLV EIKARSVVIE
RNGARQEIPL PASALGGGAP ANRNAPAMPL PPAGAAAPLS TPAMPPAPPV ANNPANTSMP
GAMLPIAPAQ INTGEEPTSQ GGGIVGPRHR AAAAARKGDT PQPGADQ
|
|---|
| |