Gene Rpic_3380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3380 
Symbol 
ID6289074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3543394 
End bp3543957 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content67% 
IMG OID642626965 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_001900933 
Protein GI187930446 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCT CGCGCATTCT TGTGATCTAC GCGCATCCTG CGCCGCGCCG GTCGCGCGCC 
AACAAGCCAC TCGCGCGTGC GCTGGCCAGC TTGCCCGGCG TGGCCATGCA CGACCTGTAC
TGGCATTACC CCGATTTCGA CATCGACGTG CGTGCCGAGC AGGAAGCGGT GGAAGCGGCG
GAGCTGATCG TCTTCCAGTT TCCGGTGCAG TGGTATGCCA CGCCGTCGCT GCTCAAGGAG
TGGATCGACG TGGTGCTGGA GATGGGCTGG GCCTATGGGC CGGGCGGCAC GGCGTTGCGC
GGCAAGCATC TAATGGTGCT CGCCACCACT GGCGGCCGCG CGCATTCCTA CAACCCGGAT
GGCGTTCACG GCCACACGTT CGACATGTTC CTGCTGCCGC TGCAGCAGAC CGCCGCGCTG
TGCGGCATGC AATGGCAGCC GCCGCATGTG CTGCACGACG CCGACGATGC GTCTGCTGAC
GTCATCGACG CCCATATCGC GCAGGTCCGC GCCGCACTGC AGCCCTGGCT CCGGGCCGAT
GCCGACGCCA ACTCCGTCGC CTGA
 
Protein sequence
MTPSRILVIY AHPAPRRSRA NKPLARALAS LPGVAMHDLY WHYPDFDIDV RAEQEAVEAA 
ELIVFQFPVQ WYATPSLLKE WIDVVLEMGW AYGPGGTALR GKHLMVLATT GGRAHSYNPD
GVHGHTFDMF LLPLQQTAAL CGMQWQPPHV LHDADDASAD VIDAHIAQVR AALQPWLRAD
ADANSVA