Gene Rpic_3374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3374 
Symbol 
ID6287835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3534926 
End bp3537124 
Gene Length2199 bp 
Protein Length732 aa 
Translation table11 
GC content68% 
IMG OID642626959 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding 
Protein accessionYP_001900927 
Protein GI187930440 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.424246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG TCGGCCAACC GCTGGACCGC ACTGACGGTC TGCTTAAAGT CACGGGCCAG 
GCACGCTACT CGGCCGAGTT TCAGGTGCCG CGTCTGGTGC ATGCGGTGCT GGTGCAAAGC
ACGGTGCCCG CCGGCCGAAT CACCCGGGTG GATACACACG TTGCGCAGGC CATGCCCGGC
GTGCTGCTGG TGATGACGCA CGAGAACGCG CCGCGCTTGC CTAACGATGG CAAGCCCGCG
CTGGAACCGC CGGCCGGACG CGTGCTCTCG TTGCTGCAGG ACGATCAGGT GCACTACAAC
GGCCAGCCCG TGGCGGTCGT CGTGGGCGAC ACTCTGGAAC ACGCGCAGGC CGCAGCGCGC
ATGGTGCGCG TAGAGGTTGC CCAGCAGCCG GCGCGGCTCG ACTTCGAAAC CGCCCGCGCC
GATGCGCACT CGCCCGGCAA GGTGCAGACG CAATCGGCCG ATACCATGCG CGGCGATATG
GCCTCCGGCA TGGCGCAGGC GGCGCAGCGC ATCGAGGCCA TCTACGGGAC GCCCATGGAA
GCGCACAACC CGATGGAGCC GCACGCCACC ATCGCCGTGT GGGAGGGCGA TTCGCTCACG
TTGTACGACA GCACGCAGTA CGTCTCGGGT GTGCGCCGCA CCGTCGCCAA GACGCTAGGT
CTGTCGCCTG ACAAGCTGCG TGTGGTGTGC CCGTTCGTGG GCGGCGGGTT CGGCTGCAAA
GGCTCGGTGT GGTCGCACGT GGTGCTGGCG GCGATGGCCG CGCGCCAAGC GGGGCGGCCC
GTCAAGCTTG TTCTGGAGCG GGCGCAGATG TTCGGCCCCG TCGGCGGGCG CCCGCGTACC
GAGCAGCGCA TCGCCATGGG CGCCGCCAGC GATGGCCGCT TCACCGCCAT CTCTCACGAC
TCGCTGACCA CCACGTCGAT GATTGAGGAT TGGACCGAGC CCTGCGCCAT CGTCACGCGC
ATGCTTTACG ACACGCCCAA CCAGCGGACG ACGCATCGGC TGGCGCGTTT GAACGTCGGT
ACGCCCACCT TCCAGCGCGC ACCCGGCGAA GCCACTGGCA CGTTCGCGCT GGAAGTCGCG
CTGGATGAGA TGGCCTACGC GCTTGGCATC GACCCCGTGG AACTGCGCCT GCGCAACGAT
GCCGCCCAAG ACCCGGAAAA ACGCATCCCG TGGTCGAGCA AATCCCTGGC TGCCTGCTAC
CGGACGGGCG CCGAGCGCTT CGGCTGGGCG CGCCGCAACC CGCAGCCGGG CAGCATGCGC
GAGGGCACTA CGCGCGTCGG CTGGGGCATG GCCACGGCCA CGTACCCAGC CAATCGCAGC
GCGGCTGCTG CCACGGCGCG CTATCTGCCC GACGGTACGG CGCAGGTCGA ATCGGGATCG
CAGGATCTGG GCACCGGCAC TTACACGGTG ATGACGCAGG TGGCGGCCGA TGCCATGGGC
ATGCCCGTCG ACCGCGTGCT CTTCAGTCTG GGCGATACGC GCATGCCCGA AGCGCCGGTG
TCGGGCGGCT CGCAGAGCGT GGCCAGCGTA TCGCCCGCGG TGCAGGCCGC CGGCCAGCAG
GCACGCGATG CATTGATTGC CGCGGCCATT GCCGACGCCA GTTCGCCGCT GCATGGGCTG
GACGCGGGCG CCATCACGGT GGCCGATGGT GTTCTGAGCG CACACAGCGG TGCTCGGGAA
CCGGCGGCTG CCGTAGTCGC CCGCTATGGT CGCCCCATCG AGGTGACCGC CAAGGTGCAG
CCGGGCGAAG AGAAGCAGAA GTTCTCAATG CACTCGTTCG GCGCGGTGTT TGCCGAGGTC
CATGTCGACG CGGACCTGGG CGTGATCCGC GTCTCGCGCA TAGTGGGGAG CTACGGCGTC
GGGCGGTTGC TCAACGCCAA GACGGGCCGT AGCCAGCTCA TGGGCGGCAT CGTCTGGGGC
ATAGGCATGG CGCTGTTCGA AGAGAGCCTG CTGGACCCGC GTTACGGTCG CATCGTCAAC
AACAACCTGG CGGAGTACCA CGTGCCCGTC AACGCCGATG TGCCCGACAT CGACATCCTC
GTACTCGACG AGGCGGACCC GCACATCAAC CCGCTGGGCG CCAAGGGCAT CGGCGAGATC
GGCATCACCG GCGTGCCGGC GGCCATCGCC AACGCCGTCT ATCACGCCAC CGGCCGGCGC
GTGCGCGAAT TGCCGATCAC GCTCGACAAG CTCATCTGA
 
Protein sequence
MSNVGQPLDR TDGLLKVTGQ ARYSAEFQVP RLVHAVLVQS TVPAGRITRV DTHVAQAMPG 
VLLVMTHENA PRLPNDGKPA LEPPAGRVLS LLQDDQVHYN GQPVAVVVGD TLEHAQAAAR
MVRVEVAQQP ARLDFETARA DAHSPGKVQT QSADTMRGDM ASGMAQAAQR IEAIYGTPME
AHNPMEPHAT IAVWEGDSLT LYDSTQYVSG VRRTVAKTLG LSPDKLRVVC PFVGGGFGCK
GSVWSHVVLA AMAARQAGRP VKLVLERAQM FGPVGGRPRT EQRIAMGAAS DGRFTAISHD
SLTTTSMIED WTEPCAIVTR MLYDTPNQRT THRLARLNVG TPTFQRAPGE ATGTFALEVA
LDEMAYALGI DPVELRLRND AAQDPEKRIP WSSKSLAACY RTGAERFGWA RRNPQPGSMR
EGTTRVGWGM ATATYPANRS AAAATARYLP DGTAQVESGS QDLGTGTYTV MTQVAADAMG
MPVDRVLFSL GDTRMPEAPV SGGSQSVASV SPAVQAAGQQ ARDALIAAAI ADASSPLHGL
DAGAITVADG VLSAHSGARE PAAAVVARYG RPIEVTAKVQ PGEEKQKFSM HSFGAVFAEV
HVDADLGVIR VSRIVGSYGV GRLLNAKTGR SQLMGGIVWG IGMALFEESL LDPRYGRIVN
NNLAEYHVPV NADVPDIDIL VLDEADPHIN PLGAKGIGEI GITGVPAAIA NAVYHATGRR
VRELPITLDK LI