Gene Rpic_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3356 
Symbol 
ID6287687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3512884 
End bp3514032 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content68% 
IMG OID642626940 
Productcation diffusion facilitator family transporter 
Protein accessionYP_001900909 
Protein GI187930422 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCA CATCCTCGAC AGCACCTTCC GCGGCCGCGC GCCAGCAGAG CGCCGAACGC 
TCCACCCTGG TGAGTGCGGG CGTCAATTGC GTGCTCTCGG CGGGGCAGAT TGCGGCGGGG
CTGTGGTCGC ACTCGCAGGG CTTGGTGGCC GACGGGCTGC ATACGTTGTC CGACTTGATC
GCCGATGGCA TCGTCTTCAT TGCCAACCGC AACAGCCACA AGGGACCGGA CGAAGACCAC
CAGTACGGCC ACGCGCGCTA CGAGAACGCC GCGTCGCTGG GGCTGGGGTT GCTGCTGGTC
GGGGCGGGTG CGGGCATGAT CTGGGCTGCG GTGGAGAGCC TGCGCTCGCC GCAGGGGCCG
GCGCCGGTGC ATGGTCCGGC GCTAGTGGTG GCGTTGATCG CGCTGGCGGC CAAGGAGGGG
CTCTTTCGCT ACATGCTGGC CATGGCCAAG CGCATCAACT CACGCATGCT GATTGCAAAT
GCGTGGCATG CGCGTTCCGA CGCGGTGTCG TCGTTGGTGG CGGCCGTCGG CGTGGCGGGC
AACCTGATGG GCTATCACTG GCTCGACCCG GTGGCCGCCT GCGTTGTCGG GTTGATGATT
GGCCGTGTGG GCGTGCGCTT TGGTTGGGAA GCGCTCAATG ACCTGATGGA CCGGGCCTTG
CCGCCCCCCC AGGTGGAGGC GATTCGTGCC AGCCTGGAAG CCACGCCGGG CGTGATCAAC
GTGCACGACC TGCGTACGCG TGTGACAGGA GACCAGGCAT TGGTCGACGC GCATATCGAG
GTGGATCCGC GCGTCTCCGT GAGCGAGGGC CATGCGATTG CTGTCCGGGC CCGCACCAAC
GTGCTGACGG CGCATACGGC GATGGCGGTG CTCGACGTGC AAATTCACGT CGACCCTCGC
GAGCATATCG CGACCGACCC CGTGCCGCTG CCCGACCGCG AGGCGCTGCG CGCCGTGCTG
GCACAACTGC TGCCGCCCGG CACGCCGCTC GACGCGCGCC ACTGCGTGCT GCATTACGTT
GATGGGGCGG TGGAAGTTGA CCTGGTCTTG CCGCCCGCGC TGGCTGGCGA ACTCGCGCGC
ATTGCCGATG CCGTCCACGC GCGGTGGGAT GGTCTTGTGC GCCTGCGCGT GCTCGTCACA
GACGCCTAG
 
Protein sequence
MTPTSSTAPS AAARQQSAER STLVSAGVNC VLSAGQIAAG LWSHSQGLVA DGLHTLSDLI 
ADGIVFIANR NSHKGPDEDH QYGHARYENA ASLGLGLLLV GAGAGMIWAA VESLRSPQGP
APVHGPALVV ALIALAAKEG LFRYMLAMAK RINSRMLIAN AWHARSDAVS SLVAAVGVAG
NLMGYHWLDP VAACVVGLMI GRVGVRFGWE ALNDLMDRAL PPPQVEAIRA SLEATPGVIN
VHDLRTRVTG DQALVDAHIE VDPRVSVSEG HAIAVRARTN VLTAHTAMAV LDVQIHVDPR
EHIATDPVPL PDREALRAVL AQLLPPGTPL DARHCVLHYV DGAVEVDLVL PPALAGELAR
IADAVHARWD GLVRLRVLVT DA