Gene Rpic_3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3344 
Symbol 
ID6288536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3500886 
End bp3501779 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content68% 
IMG OID642626928 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001900897 
Protein GI187930410 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAG ACGCCAACAC CGTCCAAGCG GCGATTCATC CGCCTGAAGC GGCGCTCTCG 
CGCTTCCCGC AGTTGCTGCG CTTCTGGCGT ACGCGGCGCG GGTATAGCCA GCTGGCGCTG
GCCCTGGCGG CGGGTGTGTC GCAACGGCAT GTGAGCTTTC TGGAATCGGC CCGCGCGGCA
CCCAGCCGCA ACATGATCCT GCAACTGGCC GAGGAGCTGA ACGTGCCGCT GCGCCATCGC
AACCAAATGC TGCTGGCGGC CGGTTTCGCT CCCGCCTATT CCGAACGGGG CCTCGCCACG
CCGGCCGATG AGGCTTCGCC GATGATGCAG GCAGTGCGCC ATGCGGTGAA GCTGATCCTC
GACAAGCAGG CACCGTATCC GGCCATCGTG CTCGACCGCT TCTGGCATGT GCTCGACGCC
AACGCCGCGC ATCGGCGCCT GATGCGCTGG GCCATCGGCG ACGACCGGTC CGAAGGCGCG
CCAGGCGCCG TCAACATGAT GAAGCTGGTG TTCGACCCGA CCGCGCTGTG GCCGGCCATT
GCGAACCCCG ATGTCGTCGG CCGCTACTTG GCCCGGCGCG TGCGGCAGGA GCTGGCCCTG
CAAGCCATCG ACCCCGCGAC GCAACGGCTG CTGCACGACA TCCGCGCGAT GCAACCTGCG
CTGTTCGATG CGGCTGATGC ACCGCCCCCC CCCGCCGCAT CAGCCCAGGA CGCCGCTGAT
CCGCCGCCGT TCCTGCCCGT CTCACTGCAG CGCGACGGCG TGACGATCTC GCTGTTCTCC
ACGCTCACCA CGCTGGGCAC GCCGCGCGAT GCGGGGCTGC AGGAAATGCG CATCGAGTGC
TTTTATCCGG CAGACGAGGC GTCGCGGCGG ACGTTGGAGC GTATTACGCT GTAA
 
Protein sequence
MLEDANTVQA AIHPPEAALS RFPQLLRFWR TRRGYSQLAL ALAAGVSQRH VSFLESARAA 
PSRNMILQLA EELNVPLRHR NQMLLAAGFA PAYSERGLAT PADEASPMMQ AVRHAVKLIL
DKQAPYPAIV LDRFWHVLDA NAAHRRLMRW AIGDDRSEGA PGAVNMMKLV FDPTALWPAI
ANPDVVGRYL ARRVRQELAL QAIDPATQRL LHDIRAMQPA LFDAADAPPP PAASAQDAAD
PPPFLPVSLQ RDGVTISLFS TLTTLGTPRD AGLQEMRIEC FYPADEASRR TLERITL