| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3339 |
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| Symbol | |
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| ID | 6289465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3495244 |
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| End bp | 3496557 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642626924 |
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| Product | metabolite/H+ symporter, major facilitator superfamily (MFS) |
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| Protein accession | YP_001900893 |
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| Protein GI | 187930406 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.267383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCA CCATGCATAC CACCAACCCC AATGAATCCA AGGCTCGCAC CGTCTTCCGG
GTGGTCAGCG GCAACTTCCT GGAGATGTAC GACTTCATGG TCTACGGCTA TTACGCCAAG
GCCATTGCCG ACACCTTCTT CCCCGCCGGC AACGAGTTCC TCTCGCTGAT GCTGTCGCTG
GTGACCTTTG GCGCCGGCTT CCTGATGCGG CCCCTGGGGG CAATCTTCCT GGGCGCGTAC
ATCGACCGTC ACGGCCGCCG CACAGGGCTG ATCGTCACGC TGGCGCTCAT GGCCTGCGGC
ACGCTGCTGA TCGCGCTGGT GCCAAGCTAC GCCACCATCG GGCTGGCGGC GCCGCTGCTG
GTCCTGATCG GCCGTTTGCT GCAGGGCTTT TCGGCCGGCG TGGAGCTGGG CGGTGTGTCG
GTCTACCTGG CCGAAATCGC CACCCCGGGC AAGAAGGGCT TCTTCGTGAG CTGGCAATCG
GCCAGTCAGC AGGTGGCCGT CATGTTTGCC GCGCTGCTGG GCGTGCTGAT GTCGTACCTG
CTGCCGCCGT CTGAGATGAG CGCCTGGGGC TGGCGCGTGC CGTTCCTGAT CGGCTGCCTG
ATCGTGCCGT TCCTGTTCAT CATCCGCCGC TCGCTGCAAG AGACCGAAGA GTTCCAGAAG
CGCAAGCACC GTCCGGACCT GCGCGCCGTG TTCCGCTCGA TGGGCCAGAA CTGGCGCCTG
GTAGGCGCGG GCACGCTGAT GGTCGTGATG ACCACGGTAT CGTTCTACCT GATCACAGCC
TACACGCCGA CCTTCGGCAA GAGCGTGCTG CACCTGTCCG ACATGGACAG CCTGATCGTC
ACGCTGTGCG TGGGCGCCTC GAACTTCTTC TGGCTGCCGA TGATGGGCGC GGTGTCTGAC
CGCGTCGGCC GCCGCCCGCT GCTGATCCTC TTTACCGTGC TGATGCTGGT GACGGCCTAC
CCGGCCATGC AGTGGCTGGT TGCTGCACCG TCGTTCGCCC GCATGCTGAC CGTGCTGCTA
TGGCTGTCGT TCCTGTACGG CAGCTACAAC GGCGCGATGG TCGTCACGCT CACCGAGATC
ATGCCGCCGG AAGTGCGCAC CACCGGGTTC TCGCTGGCGT ACAGCCTCGC CACAGCCATC
TTCGGTGGCT TCACCCCGGC GATTGCCACA TGGCTGATCC ACGAAACGGG CAACAAGGCG
ATGCCGGGCG TGTGGGTGTC GTTCGCCGCG CTGTGCGGGT TGATTGCCAC GCTGGCGATC
GTCAAGCCGG CGGGCAGGCA TGAGCATGGG GCGGGCACGG CGCCTGTGGC CTGA
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| Protein sequence | MTSTMHTTNP NESKARTVFR VVSGNFLEMY DFMVYGYYAK AIADTFFPAG NEFLSLMLSL
VTFGAGFLMR PLGAIFLGAY IDRHGRRTGL IVTLALMACG TLLIALVPSY ATIGLAAPLL
VLIGRLLQGF SAGVELGGVS VYLAEIATPG KKGFFVSWQS ASQQVAVMFA ALLGVLMSYL
LPPSEMSAWG WRVPFLIGCL IVPFLFIIRR SLQETEEFQK RKHRPDLRAV FRSMGQNWRL
VGAGTLMVVM TTVSFYLITA YTPTFGKSVL HLSDMDSLIV TLCVGASNFF WLPMMGAVSD
RVGRRPLLIL FTVLMLVTAY PAMQWLVAAP SFARMLTVLL WLSFLYGSYN GAMVVTLTEI
MPPEVRTTGF SLAYSLATAI FGGFTPAIAT WLIHETGNKA MPGVWVSFAA LCGLIATLAI
VKPAGRHEHG AGTAPVA
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