Gene Rpic_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3336 
Symbol 
ID6286284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3491206 
End bp3491832 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID642626921 
Productprotein of unknown function DUF1415 
Protein accessionYP_001900890 
Protein GI187930403 
COG category[S] Function unknown 
COG ID[COG3310] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGATC CCGCCCCCGA TTTCGTCCTG CTCGATCCAC CCGCCGACGC CCTGCCGTTG 
GACGCGGACG CCGTTGCCCT TCATGTCGCG AGCGTGCAGC GCTGGCTGGA AGACGCCGTC
ATCGGCCTGA ACCTCTGCCC GTTCGCCAAG GCCGTCCACG TCAAGCGGCA GGTCCGATAC
GCCGTCAGCC GCGCCACGAT GGACGGCGAC GTGCTCGACC ACCTGCGTGC CGAAGCCGAT
CTGCTGCACA CCACCCCCGC CGCACAGATC GACACCACGC TGCTGATCGT CCCCGCCCTG
GCCGATTTCC TCGATTTCCA CTCGCTTACG GAGCGCGCCG AATCGCTGCT CGCCAAGGCC
GGCTACGAAG GCGAGCTGCA ACTGGCCAGC TTCCACCCCG ATTTCGTCTT CGCCGATGCC
GAGCCGGACG ACATCGCCAA CGCCACCAAC CGCGCGCCCC TCCCGATCCT GCATCTGCTG
CGCGAAGACA GCATCGCCCG CGCCGCCGCG GCCGTGCCCG ACGCAGCGGA CATCTACGAG
CGAAATATCG CGACGATGGA AAAGCTGGGC CCCGAAGGCT GGGCAGAAAT GGCAAAGAAG
TTCGGCAAGA CACCGCCCCG CGATTAA
 
Protein sequence
MSDPAPDFVL LDPPADALPL DADAVALHVA SVQRWLEDAV IGLNLCPFAK AVHVKRQVRY 
AVSRATMDGD VLDHLRAEAD LLHTTPAAQI DTTLLIVPAL ADFLDFHSLT ERAESLLAKA
GYEGELQLAS FHPDFVFADA EPDDIANATN RAPLPILHLL REDSIARAAA AVPDAADIYE
RNIATMEKLG PEGWAEMAKK FGKTPPRD