Gene Rpic_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3311 
Symbol 
ID6286467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3453610 
End bp3454314 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID642626887 
Productprotein of unknown function DUF1175 
Protein accessionYP_001900865 
Protein GI187930378 
COG category[S] Function unknown 
COG ID[COG3234] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.956301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.102999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGC GCGCCCAGGC CGCTGCGTTG AACCGCCGCC GTTGGTTGAC GGCGGTGGGA 
GCCAGCCTGC TCGCTCCGTC TGTGCATGCG CTGTCAGGCT GGGCCGATAC GGCGCCCGCG
GATGCCGATG CGCTCACGCC GGACCAATCC AGCATGTTCC GTGCGTGGTT CGTGCGCATC
GTCAACGAGC AGCTCCGCCA GGGCCCGACG CCGCGCTGGA CGCACCGCGA CTGTGCCGGG
CTGGTGCGCT TTGCCGCCGG CGAGGCGCTG CGCACGCACG ACGCCCGCTG GCTGCGCGCC
AACGGCATGC GCGATGCAGA ATCCACACGG CAACTGCCGC CCGAGCTGAA TCTCACGCCC
GCCCAGCGCA CGCTCACGCA GCGGTGGGCG CGCTTCGACG GCAGCACCGG CGCGTATGTG
TCGGCGCTCG GGCTCATCCA GCAGAACAGC CGATTCATTG CGAAGGACGT CAACCAGGCG
CTCCCTGGCG ATCTGCTCTT CTTCGATCAA GGCGACGACC AGCATCTGAT GATCTGGATG
GATCGCTACA TCGCCTACCA CACCGGCACC GTTACCCGCA CCGACAACGG CCTGCGTGCG
GTCCCGGTCT CTGAACTGAT GCAATGGAAA GACTCGCGCT GGCAGCCGCA GAGCGGCAAC
CCCAACTTCA TCGGCGTGTT TCGTCTGGCC TTTTTGACAC GGTAG
 
Protein sequence
MTLRAQAAAL NRRRWLTAVG ASLLAPSVHA LSGWADTAPA DADALTPDQS SMFRAWFVRI 
VNEQLRQGPT PRWTHRDCAG LVRFAAGEAL RTHDARWLRA NGMRDAESTR QLPPELNLTP
AQRTLTQRWA RFDGSTGAYV SALGLIQQNS RFIAKDVNQA LPGDLLFFDQ GDDQHLMIWM
DRYIAYHTGT VTRTDNGLRA VPVSELMQWK DSRWQPQSGN PNFIGVFRLA FLTR