| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3310 |
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| Symbol | |
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| ID | 6286466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3448817 |
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| End bp | 3453601 |
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| Gene Length | 4785 bp |
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| Protein Length | 1594 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642626886 |
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| Product | alpha-2-macroglobulin domain protein |
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| Protein accession | YP_001900864 |
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| Protein GI | 187930377 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0596632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACC GTTGGCTGTC GTTCAATCTC GTTGCCGCCG TCTGCGTGAC GGTGCTGGCG
TTGGTCGCTT CGGTGTCGAC AGCGCACGCG GCCGATGCGC AGGAAGCGCC GAACCCAACG
CTGTTCGACG TGCCGGGCAG CGGCTACGAG CCGTTCAAGG GGCAGCCGTT CTTCCTGCTC
TCGGATGCGA GCTACGGGAC TGATCAGGAA GCGATGGTCC GCCTTGAAGC GCCGGGCCGC
GAGTACAAGG ACGAACTGTC CCGCTACGGC GGCGCGGACA TCCTCGTCTA CCGCGTGCCC
CAGCCGCTGG AATTTCTGAA GGCGCAGAAG AACCTGCACC GCATCGACGT CAAGGCCAAC
TACACGGGCG AAGGTCTGGC CAACACGCTC GCCTATCTGT GGGACAACTG GACGCGCCAG
GCCCGCCGCG CTTGGCAACG CGTGCTGTCG TTCGCCACGC GCAGCAAGGC CGTAGAGACT
GCGCCGCAGT TCAGCATGGG CGATCAGATG ACCGCGCCCA CGCGCTTCTC GAACAACCCG
CAGTACGCGC CGCTCAAGGG CTACGAACTG CTGGGCCGCT TTCGCTACCC GATCTGGGAC
GCCAAGCCCA TCGCACCGCC CAAGGACGTG AAGCTCGAGG GCAGCAGCAG CGAATGGATG
CCGCAGAACG CCGGCAACGT GATGATCCCG GTTGGCAAGC TGCCCGCCGG TTTGTACATC
GTTGAAGCCG TGATTGGCGC GTACCGTGCG CACACGCTGC TGTTTGTGTC GGACACCGTG
GCCGTCACCA AGGGCACTTC GCAAGGGATG ATGGTGTGGA CGGCCGAGCG CAAGAGCGGC
AAGCCGGTCA GCGGTGCATC GGTGAACTGG ACCGACGGCG TAGGCGTGCT CGCTTCCGGC
ACCACCGAGG TCGACGGCAC GGCCGACCTG CGCCACGTGT CGCCCGAACG CAGCTACGTG
ATCGGCAGCG ACCGCGCGGG CGGCGTGTTC ATCTCCGAGA ATTTCTATTA CGACAGCGAG
ATCTACAACA CCAAGCTGTA CGCCTTTACC GATCGCCCGC TGTATCGCCC CGGCGACGAA
GTCAGCGTCA AGTTCATCGG CCGCAATTTC AAGAACGCGA TCGAATCGAC CGTGCCGGCG
GCCGGCGACA TCAAGCTGCA AGTGCTTGAC CCGAACGGCG CGCCGGTGGC CACCTCCACC
ACGGGGCTGG CGGGCGAGAT GGGCGCCGAC GCGCGCTTTA CGCTGCCATC CAACGCACCG
GCCGGTGGCT ACTCGCTGCG CTTCGACTAC AACGGCGGCA CGTACGGCGG CGCCTTCCGC
GTGGCCGAAT ACATCAAGCC GCACTTTGAC GTGAGCCTGT CGCTGGACAA GGCCAGCTAC
GGCACGGGCG AAGCGGTCAA GGGCAAGATC AGCCTGCGCT ATCCGGACGG CAAGCCGGTC
AAGAACGGCA AGGTGTCGGT CAACCTGCGC GCACAACAGG TGACGATGGT GGAGGGCGAA
CTGCGTTACG CGGGCCTGTT CCCCGTCAAG CTGGAGCAGC AGGAGCTGAC CACCGATGGT
GACGGCAACG CCAAGCTGGA GTTGCCCGCC GCCAAGGAGC CCAGCCGCTA CGTGGTGACC
GTGTTTGCCA ACGACGGCGC GGCGTACCGC GTGAAGGTCA CGCGCGAATT GCTGATCGCG
CGCGGCGCCA CGCCGTACAA GCTGTCGACC ACGTCGAACT TCACCACGCC GGGCCAGAAC
GTGTCGTTCA CGCTCACGCC GATGCCGGTT GTCGGTGGCG CAAGCGGTGC CAGCGCGCCG
CCCGCCAAGT GGGATCTGGT GCGCCTGGAA ACGCGCACGC GCACCGAAGG CACGCTCGCG
CCGGATGCCA AGGGCAACGC CACGTTCCCG GTCAAGTTCG ACCAGCCGGG TTCGTACACG
CTGTCGGTGC GCGATGCGGC CGGCAACCTG CTTGCCGCAT CAAGCCACTG GGTGGCCGGC
GATGGCGTGC AGACTGTGCC GGGCAACATC GAAATGGTGT TCGACCGCGA TCGCTACCAG
ATTGGCGACA CGGCCGAAGC GCTGATCACG TTCCCGCTGC CGGTGGACGA TGCGCTGCTC
ACGCTCGAAC GTGACAAGGT CGAGCACCAC GCGCTGCTCA CGCGCGGCGG CGAATGGCTG
AGCCTGCAGA AGGTCACGCC GTCGCAGTAC CGCGCCCGCA TCAAGATCGG TGCGGAGTTC
GCGCCGAACA TGACGTTCTC GGTGCTATAC GTGCGCGATG GCGACATGGT GTTCCAGAAC
GCCGGCATCG TCGTCACGCA ACCGACGCTG GACCTGGGCG TGCATGCGGA CAAGGCCGTC
TACGCGCCGG GCGAGACCGT CACGCTGGAC TTGACCAGCG CGCTGGCGGG CAAGCCCGTG
CCGGCCAACC TGACCGTGTC GGTGGTCGAC GAAATGATTT ACGTGCTGCA GCCCGAAGTG
GCGCCCAGCA TCGTCGATTT CTTCTACCAC CCCCGCCGCA ACAGCGTGCG CACCACGTCG
AGCCAGAGTT TCATCAGCTA CGACCTGGCG CTCGCCTCGT TGCCGGGCAA GCCGGGCGGC
ACGTATGGCC GCCACAACGA GCGCGGCGTG AAAGTGCTCG AGCGTCCCCG CCGTGATGAG
CAGGACACCG CTGCCTGGGT CGCCAACCTG CAGACCGGCG CCGACGGCCG TGCGCGCATG
ACCTTCAAGA TGCCGGATTC GCTGGCGCGC TGGCGCATCA CGGTGCGCGC GGTGTCCACC
ACCGGCGCAT CGGACGGCAT CGTCGGCCAG CGCACCGCGA GCATCCGCTC CGACAAACGG
CTGTACCTGA AATGGACGGG CCCACAACGC TTCCGCGAGA CCGACCAGCC GCGCCTGGAC
ATGGTCGCCT TCAACCAAAC CGACAAGGAC ATCACCGCCG ACTGGATCGT CTCGGGCGCT
GGCCTGAACA TCAACCAGCG CGTGACGCTC AAGCGCGGCG CCAACTACCT GCGCGCGCCC
GTCACGGCGC TGCAGGCGGG TGTGGTGAAT GCCGAGCTGA AGCAGGACGA CAAGGTTTCG
GACCGCCTGC AGACCACGCT CAAGCTGGAT GCGACCGGCT GGCTGGCCGA CCGCGAAAAC
GTCGTCCCGC TCACGCAGTT GCAGGGCACG CGCCTGCCGC TTGGCCTGCC GGCTGATGCG
CGCGACGTGC GCCTGCGGGT GGTCGGCAAC ACCGCCAGCC AGTTTGCTCG CGTGGCCGAT
GACCTCATCG AATATCCGTA CGGTTGCGCC GAGCAGACGG CCAGCCGCCT GATCCCACTG
GCACTCGCCC AGCAGAGTCT GGCAGCCACC GGCACGCGCC TGGGCGATGG CGGTCCGGCC
GGCACGCAAG GCGTCGACGC GCTGCTGCGC ACGCAACGCC AGCGTCTCGC ACTGCTGGCA
GGCACCAACG GCACCTTCGG CTGGTGGGGC GAGCTGACCA CCAGCAGCGC GCTGATCACG
TCGTATGCGT ATTACGCGGA TTGGCTTGCC AGCCGTTCGG TCGGCATCAG CCTGCCGGCA
GACAACTGGA AGCAGGTGCT CGAAGCCTAC AAGCGCACCA GCCAGAACGA GCCGCTGCTG
CACCGCGCGC TGGCGCTGTG GTTTGCCAAT GAGATGGGCC TGCCGGTGGC GACGCCGCTC
TCAGGCGTGG CTAACGAGCT TGCGCCCAGT GGCGGCAAGG CGGCCAAGGC CACGGCTGAT
GCCGACCCCG CAGCGGGCGA CAGCCTGATC TTCGTGGCGC CGGATTCGCC GCGCGGGCGC
CAGGTCGCGA CGGTGCTGAC GGCACAGCTG ATGCGCCAGA TCGGTCAGCC GGTGCCGGAA
GCGCTGGTCT CTGCCGAGAT TGCTGCACGC AGTGCGCTGG CTGCCAACAC CTCGCCGCTG
GTGCAGAGCC TGTTGCTGAT GGGCGGCGGG CGCTCGGCTG CCGACCCGGC GCCGCTGCTG
GCGCGCGCCA GCGCGGCCCT GCCGACGATC GACCGTGCTG TCGCGCTGGT CTGGCTGCAG
AAGGGTCTGG GTGGCCTGCA AGGCGCCAGC GTTGCCACCA TCCAGCCGGC CGTCTCGGCG
GGCGGTTGGC AGGCGACGCG CTCTCCGGTT GGTGTGCCGA CGTGGCGCTG GACCGGCGCA
CAAGCCCCCG CCGCGCTGGA CCTGACGGCG GCTCCGACCG ACGTGACCAC ACAATCGGCC
ATCGTGTCGT ACCGCAGCCG CGCGGCTGAG GCCTCCAAGC TGCCGATCAC GGTGGAGCGC
AAGCTGTACC GATTGGAGCC ACTCGATTCG GCACCGGCCA AGCCGGACCC CAAAGCGCCC
AAGCAGCCGG CGGCCGGCGC CAGCAGCAGC GGCATCGCCT TTACCGCCAA GCCGGTCAAG
CCGGGCGACA CACTCGACAG CAACGCACTC TACGTCGACG AGGTCGTGCT GACCCCGCGC
CAGGGCACGT ATCGTTACGG CCTGGTCGAA GTGCCGCTGC CGCCGGGCGC CGAAGTGGAG
GCCACCACAT GGGGCATCCA GATCGACGGC CTGAAGGGTG AGCCGAACGA AGGCAATGGC
GCGCAGGCGT TCGAGCGCAA AGCCGCGTAT GAAATGGGCC AGCTCTCGTA CAACCAGCCG
GTGCCCGCGC TGGAGCGCCC GACCGTGCTG CGCCAGCTGG TGCGCTTCTC GCTGCCGGGC
CGCTTTGCAC TGCCGCCGGT GCGCTACTTC CGCATGTACC AGCCGGAAGC CAAGGCGTTC
CAGGGCGACG GCAAGACCGC CAGCTATCCG TTCAAGGTGG AGTGA
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| Protein sequence | MRNRWLSFNL VAAVCVTVLA LVASVSTAHA ADAQEAPNPT LFDVPGSGYE PFKGQPFFLL
SDASYGTDQE AMVRLEAPGR EYKDELSRYG GADILVYRVP QPLEFLKAQK NLHRIDVKAN
YTGEGLANTL AYLWDNWTRQ ARRAWQRVLS FATRSKAVET APQFSMGDQM TAPTRFSNNP
QYAPLKGYEL LGRFRYPIWD AKPIAPPKDV KLEGSSSEWM PQNAGNVMIP VGKLPAGLYI
VEAVIGAYRA HTLLFVSDTV AVTKGTSQGM MVWTAERKSG KPVSGASVNW TDGVGVLASG
TTEVDGTADL RHVSPERSYV IGSDRAGGVF ISENFYYDSE IYNTKLYAFT DRPLYRPGDE
VSVKFIGRNF KNAIESTVPA AGDIKLQVLD PNGAPVATST TGLAGEMGAD ARFTLPSNAP
AGGYSLRFDY NGGTYGGAFR VAEYIKPHFD VSLSLDKASY GTGEAVKGKI SLRYPDGKPV
KNGKVSVNLR AQQVTMVEGE LRYAGLFPVK LEQQELTTDG DGNAKLELPA AKEPSRYVVT
VFANDGAAYR VKVTRELLIA RGATPYKLST TSNFTTPGQN VSFTLTPMPV VGGASGASAP
PAKWDLVRLE TRTRTEGTLA PDAKGNATFP VKFDQPGSYT LSVRDAAGNL LAASSHWVAG
DGVQTVPGNI EMVFDRDRYQ IGDTAEALIT FPLPVDDALL TLERDKVEHH ALLTRGGEWL
SLQKVTPSQY RARIKIGAEF APNMTFSVLY VRDGDMVFQN AGIVVTQPTL DLGVHADKAV
YAPGETVTLD LTSALAGKPV PANLTVSVVD EMIYVLQPEV APSIVDFFYH PRRNSVRTTS
SQSFISYDLA LASLPGKPGG TYGRHNERGV KVLERPRRDE QDTAAWVANL QTGADGRARM
TFKMPDSLAR WRITVRAVST TGASDGIVGQ RTASIRSDKR LYLKWTGPQR FRETDQPRLD
MVAFNQTDKD ITADWIVSGA GLNINQRVTL KRGANYLRAP VTALQAGVVN AELKQDDKVS
DRLQTTLKLD ATGWLADREN VVPLTQLQGT RLPLGLPADA RDVRLRVVGN TASQFARVAD
DLIEYPYGCA EQTASRLIPL ALAQQSLAAT GTRLGDGGPA GTQGVDALLR TQRQRLALLA
GTNGTFGWWG ELTTSSALIT SYAYYADWLA SRSVGISLPA DNWKQVLEAY KRTSQNEPLL
HRALALWFAN EMGLPVATPL SGVANELAPS GGKAAKATAD ADPAAGDSLI FVAPDSPRGR
QVATVLTAQL MRQIGQPVPE ALVSAEIAAR SALAANTSPL VQSLLLMGGG RSAADPAPLL
ARASAALPTI DRAVALVWLQ KGLGGLQGAS VATIQPAVSA GGWQATRSPV GVPTWRWTGA
QAPAALDLTA APTDVTTQSA IVSYRSRAAE ASKLPITVER KLYRLEPLDS APAKPDPKAP
KQPAAGASSS GIAFTAKPVK PGDTLDSNAL YVDEVVLTPR QGTYRYGLVE VPLPPGAEVE
ATTWGIQIDG LKGEPNEGNG AQAFERKAAY EMGQLSYNQP VPALERPTVL RQLVRFSLPG
RFALPPVRYF RMYQPEAKAF QGDGKTASYP FKVE
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