Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3300 |
Symbol | |
ID | 6287555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3436917 |
End bp | 3439088 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642626876 |
Product | elongation factor G |
Protein accession | YP_001900854 |
Protein GI | 187930367 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00108075 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00222959 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCTCGTA AGACCCCCAT TGAGCGCTAC CGTAACATCG GTATTTCCGC TCACATCGAC GCCGGCAAAA CCACCACGAC CGAGCGGATC CTGTTCTACA CCGGTGTGAA CCACAAGATC GGTGAAGTGC ATGATGGCGC CGCCACCATG GACTGGATGG AGCAGGAGCA AGAGCGCGGC ATCACCATCA CGTCTGCTGC GACCACCGCC TTCTGGAAGG GCATGGGCGG CAACTACCCC GAGCACCGCT TCAACATCAT CGACACCCCG GGCCACGTGG ACTTCACCAT CGAGGTGGAG CGTTCCATGC GTGTGCTGGA CGGCGCGTGC ATGGTGTACT GCGCAGTGGG TGGCGTGCAG CCGCAGTCGG AAACCGTCTG GCGCCAAGCC AACAAGTACA AGGTGCCGCG TCTGGCGTTC GTCAACAAGA TGGACCGTAC TGGCGCGAAT TTCTTCAAGG TCTACGACCA GCTGAAGACC CGTCTGAAGG CCAACCCGGT GCCCGTCGTG GTGCCCATCG GCGCTGAAGA CGGCTTCCAG GGCGTCGTCG ATCTGCTGGA AATGAAGGCG ATCATTTGGG ACGAAGCCAG CCAGGGCGTG AAGTTCGAAT ACCACGACAT CCCGGCCAAT CTGGTTGACG TCGCGAACGA GTGGCGCGAG AAGATGGTCG AGTCGGCAGC TGAAGCCAGC GAAGAGCTGA TGGAAAAGTA CCTGGGCGGC GAAGAGCTGT CCCGTGCTGA GATCGTCAAG GCGCTGCGCG ACCGTACCAT TGCCTGCGAA ATCCAGCCGA TGCTGTGCGG CACCGCGTTC AAGAACAAGG GCGTGCAGCG CATGCTCGAC GCCGTGATCG ACTTCCTGCC GTCGCCGGTC GACATTCCGC CGGTTCAGGG CATCGACGAA AACGACGAAG AGAAGAAGCT CGAGCGCAAG GCCGACGACA ACGAAAAGTT CTCGGCACTG GCGTTCAAGA TCATGACCGA CCCGTTCGTT GGTCAGCTGA TCTTCTTCCG CGTCTACTCG GGCAAGATCA ACTCCGGGGA CACCGTGTAC AACCCGGTGA AGCAGAAGAA GGAGCGTCTG GGCCGTATTC TGCAGATGCA CGCCAACCAG CGCGAAGAAA TCAAGGAAGT GCTGGCAGGT GACATCGCCG CCGCGGTGGG CCTGAAGGAC GCCACTACGG GCGACACGCT GTGCGACCCG AGCGCTCCGA TCATTCTCGA GCGCATGGTG TTCCCGGAGC CGGTGATCTC GCAGGCTGTC GAGCCCAAGA CCAAGGCTGA CCAGGAAAAG ATGGGCATCG CCCTGAACCG CCTGGCCGCT GAAGATCCGT CGTTCCGCGT GCGTACCGAT GAAGAATCGG GCCAGACCAT CATTTCGGGC ATGGGCGAGC TCCACCTCGA AATTCTGGTC GACCGCATGA AGCGCGAATT CGGTGTGGAA GCCAACATCG GCGCGCCGCA GGTTGCCTAC CGCGAAACCA TTCGCAAGAA GGTTGAAGAC GTCGAAGGCA AGTTCGTCAA GCAATCGGGC GGCCGCGGTC AGTATGGACA CGCCGTGATC ACGCTGGAAC CGCTGGAAGA AGCAGAGAAG GCGGCAGCGA AGGCGGCGGC AACGACGGCA GCAGCAGCTG CTGCTGCGGT CAATGGTTTC GTGTTCGTCG ACGCCATCAA GGGCGGTGTG ATTCCTCGCG AATACATCCC GGCGGTCGAA AAGGGCATCG TCGACACGCT GCCGGCCGGT ATTCTGGCGG GTTTCCCGGT GGTGGACGTG AAGGTCACGC TGACGTTTGG TTCGTACCAC GACGTGGACT CGAACGAAAA CGCGTTCCGC ATGGCCGGCT CGATGGCCTT CAAGGAAGCA ATGCGCAAGG CCACTCCGGT TCTGCTTGAG CCGATGATGG CTGTGGAAGT GGAAACGCCG GAAGACTACA TGGGTACCGT GATTGGCGAT CTGTCGTCCC GTCGTGGCAT CGTGGAAGGC ACGGACGACA TGGTCGGTGG CGGCAAGATC GTCAAGGCCC AAGTCCCGTT GTCGGAGATG TTCGGTTATT CGACGTCGCT GCGCTCGGCC ACGCAAGGCC GCGCCACGTA CACCATGGAA TTCAAGCAAT ACGCTGAGGC ACCGAAGAAC GTCGCTGACG CAGTAATGAA GAAGTCCAGC GAAGGTAAGT AA
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Protein sequence | MARKTPIERY RNIGISAHID AGKTTTTERI LFYTGVNHKI GEVHDGAATM DWMEQEQERG ITITSAATTA FWKGMGGNYP EHRFNIIDTP GHVDFTIEVE RSMRVLDGAC MVYCAVGGVQ PQSETVWRQA NKYKVPRLAF VNKMDRTGAN FFKVYDQLKT RLKANPVPVV VPIGAEDGFQ GVVDLLEMKA IIWDEASQGV KFEYHDIPAN LVDVANEWRE KMVESAAEAS EELMEKYLGG EELSRAEIVK ALRDRTIACE IQPMLCGTAF KNKGVQRMLD AVIDFLPSPV DIPPVQGIDE NDEEKKLERK ADDNEKFSAL AFKIMTDPFV GQLIFFRVYS GKINSGDTVY NPVKQKKERL GRILQMHANQ REEIKEVLAG DIAAAVGLKD ATTGDTLCDP SAPIILERMV FPEPVISQAV EPKTKADQEK MGIALNRLAA EDPSFRVRTD EESGQTIISG MGELHLEILV DRMKREFGVE ANIGAPQVAY RETIRKKVED VEGKFVKQSG GRGQYGHAVI TLEPLEEAEK AAAKAAATTA AAAAAAVNGF VFVDAIKGGV IPREYIPAVE KGIVDTLPAG ILAGFPVVDV KVTLTFGSYH DVDSNENAFR MAGSMAFKEA MRKATPVLLE PMMAVEVETP EDYMGTVIGD LSSRRGIVEG TDDMVGGGKI VKAQVPLSEM FGYSTSLRSA TQGRATYTME FKQYAEAPKN VADAVMKKSS EGK
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