Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3282 |
Symbol | rplF |
ID | 6288297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3427356 |
End bp | 3427889 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642626858 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001900836 |
Protein GI | 187930349 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000490691 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00000852439 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTCGCG TAGGTAAGGC CCCCATCGCG CTGCCCAAGG GCGCAGAAGT CAATTTCGCT GGTGGTCTGC TGACCGTCAA GGGCCCGTTG GGCACGCTGA CGCAGCCGAT CCACTCGCTG GTCAAGGTCA ACACCGACAA CGGCACGATC ACGTTCGCGC CGGCAGATGA GTCGCGTGAA GCCAATGCGT TGCAAGGCAC GATGCGCGCC CTGACCGCCA ACATGGTCAA GGGTGTGACG ACGGGCTTCG AGCGCAAGCT GAACCTGGTC GGCGTGGGTT ATCGTGCATC GGTTCAGGGC ACCGCCCTGA AGCTGCAGCT CGGTTTCTCG CACGACGTGA TCCATGAGAT GCCGGAAGGC GTGAAGGCGG AAACGCCGAC GCAGACCGAG ATCATCATCA AGGGTTCGGA CAAGCAAAAA GTTGGTCAGG TCGCCGCTGA AGTGCGTGGT TATCGTCCGC CTGAGCCCTA CAAGGGCAAG GGTGTGCGCT ACGCCGACGA GCGTGTGATC CTGAAGGAAA CCAAGAAGAA GTAA
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Protein sequence | MSRVGKAPIA LPKGAEVNFA GGLLTVKGPL GTLTQPIHSL VKVNTDNGTI TFAPADESRE ANALQGTMRA LTANMVKGVT TGFERKLNLV GVGYRASVQG TALKLQLGFS HDVIHEMPEG VKAETPTQTE IIIKGSDKQK VGQVAAEVRG YRPPEPYKGK GVRYADERVI LKETKKK
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