Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3277 |
Symbol | secY |
ID | 6287425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3424413 |
End bp | 3425735 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642626853 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_001900831 |
Protein GI | 187930344 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.821024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000244814 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCCAGG CCAAGAACAC GGCCAAGTAC GGCGATCTTC GCCGTCGGCT GGTGTTCCTG GTGCTGGCAT TGCTGGTGTA CCGGATCGGC GCGCACATTC CTGTGCCGGG TATCGATCCG GATCAACTGG CGCAGCTTTT CCAACGGCAG TCGGGTGGCA TCCTCGGGAT GTTTAACCTG TTCTCCGGCG GCGCGCTGTC GCGTTTCACA GTGTTTGCGT TGGGGATCAT GCCGTACATC TCGGCGTCGA TCATCATGCA GCTGCTGACG ATCGTGCTGC CGCAGCTGGA ATCGTTGAAG AAGGAAGGCC AGGCCGGCCA GCGCAAGATT ACGCAGTACA CGCGCTACGG CACGGTCATC CTGGCGACGT TCCAGGCGCT AGGGATTGCA GTAGCCCTGG AAGCGCAGCC CGGTCTGGTG CTGGATCCGG GTCTGATGTT CCGGGCCACC GCGGTGATCA CGCTGGTGAC GGGCACGATG TTCCTGATGT GGCTGGGTGA GCAGATCACC GAGCGTGGTC TGGGCAACGG GATCTCGATC ATCATTTTTG GCGGGATTGC TGCAGGCCTT CCCAACGCGA TTGGCGGGCT GTTCGAGCTG GTGCGTACGG GTTCGATGGG AATTTTCTCG GCGATCCTGG TGGTGGCGAT TATTGGTGCG GTGACGTTTG TGGTCGTGTT CATCGAACGC GGCCAGCGCA AGATCCTCGT CAATTACGCC AAGCGGCAGG TTGGTAACAA GATTTATGGC GGACAGTCGT CGCATCTGCC GCTGAAGTTG AATATGGCCG GGGTGATTCC GCCGATCTTT GCATCGTCGA TCATTCTGTT CCCGGCCACG ATCGCGGGCT GGTTTACAGC TGGCAACTCG ACGAATCCGG TGGCACGGGT TGTCAAGGAC TTGGCAGCAA CGCTGTCGCC GGGTCAGCCG GTCTACATCC TGCTGTATGC GGCGGCGATC ATCTTCTTCT GTTTCTTCTA CACCGCACTG GTTTATAACA GCCGGGAAGT GGCAGATAAC CTGAAGAAGA GTGGGGCGTT CATTCCGGGC ATCCGTCCGG GCGAGCAAAC CACGCGGTAT ATCGACAAGA TTCTGGTGCG TCTGACCCTG GCGGGTGCGA TCTACATCAC GCTGGTGTGT CTGTTGCCGG AGTTCTTGGT GCTGCGCTGG AATGTGCCGT TCTACTTCGG TGGGACGTCC CTGTTGATCA TCGTGGTTGT CACGATGGAC TTCATGGCGC AAGTGCAGTC CTACGTGATG TCTCAGCAGT ACGAGTCTTT GATGAAGAAG GCGAATTTCA AGGGAAACCT GACACTCCGC TAG
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Protein sequence | MAQAKNTAKY GDLRRRLVFL VLALLVYRIG AHIPVPGIDP DQLAQLFQRQ SGGILGMFNL FSGGALSRFT VFALGIMPYI SASIIMQLLT IVLPQLESLK KEGQAGQRKI TQYTRYGTVI LATFQALGIA VALEAQPGLV LDPGLMFRAT AVITLVTGTM FLMWLGEQIT ERGLGNGISI IIFGGIAAGL PNAIGGLFEL VRTGSMGIFS AILVVAIIGA VTFVVVFIER GQRKILVNYA KRQVGNKIYG GQSSHLPLKL NMAGVIPPIF ASSIILFPAT IAGWFTAGNS TNPVARVVKD LAATLSPGQP VYILLYAAAI IFFCFFYTAL VYNSREVADN LKKSGAFIPG IRPGEQTTRY IDKILVRLTL AGAIYITLVC LLPEFLVLRW NVPFYFGGTS LLIIVVVTMD FMAQVQSYVM SQQYESLMKK ANFKGNLTLR
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