| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3272 |
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| Symbol | rpsD |
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| ID | 6287943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3422381 |
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| End bp | 3423004 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642626848 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001900826 |
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| Protein GI | 187930339 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00373853 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCACGCT ATACCGGCCC CAAGGCGAAA CTGTCTCGCC GCGAAGGTAC TGACCTTTTC
CTCAAGAGCG CACGCCGCTC GCTCGCCGAC AAATGCAAGC TGGACAGCAA GCCTGGTCAG
CACGGCCGCA CTTCCGGCGC CCGAACGTCC GACTACGGCA ACCAGCTGCG TGAAAAGCAG
AAGGTCAAGC GCATCTACGG TGTGCTGGAG CGTCAATTCC GCCGCTACTT CGCTGAAGCC
GATCGCCGTA AGGGCAACAC GGGTGAAACC TTGCTGCAAC TGCTGGAATC GCGCCTGGAC
AACGTCGTCT ATCGTATGGG CTTCGGCTCG ACCCGCGCGG AAGCGCGTCA GCTGGTGTCG
CACAAGGCGA TCCTGGTGAA TGGTCAAGCG CTGAACGTGC CGTCGGCTCA GGTCAAGTCG
GGCGACGTCA TTGCCATCCG CGAAAAGTCG AAGAAGCAAG TGCGTATTGC CGAGTCGCTG
ACGCTGGCTG AGCAGTCCGG CTTCCCGATC TGGGTTGCCG TGGATGCCAA GAAGATGGAA
GGCACCTTCA AGCAAGCCCC GGATCGCGCA GATATCGCCG GCGACATCAA CGAAAGCCTG
ATCGTCGAAC TGTATTCGCG TTAA
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| Protein sequence | MARYTGPKAK LSRREGTDLF LKSARRSLAD KCKLDSKPGQ HGRTSGARTS DYGNQLREKQ
KVKRIYGVLE RQFRRYFAEA DRRKGNTGET LLQLLESRLD NVVYRMGFGS TRAEARQLVS
HKAILVNGQA LNVPSAQVKS GDVIAIREKS KKQVRIAESL TLAEQSGFPI WVAVDAKKME
GTFKQAPDRA DIAGDINESL IVELYSR
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