Gene Rpic_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3270 
SymbolrplQ 
ID6289051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3420608 
End bp3421006 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content63% 
IMG OID642626846 
Product50S ribosomal protein L17 
Protein accessionYP_001900824 
Protein GI187930337 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0203] Ribosomal protein L17 
TIGRFAM ID[TIGR00059] ribosomal protein L17 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00368321 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTCACC GTCATGGTTT GCGGAAACTG AACCGCACTT CGTCGCACCG TCTCGCGATG 
CTGCGCAACA TGTCCAACTC GCTGCTGCAG CACGAGCTGA TCAAGACCAC CGTGCCGAAG
GCCAAGGAAC TGCGCAAGGT TGTCGAGCCT CTGATCACGC TGGCCAAGAA GGACACCGTC
GCCAACCGCC GTCTGGCATT CGCCCGTCTG CGCGACCGCG ACATGGTTAC CAAGCTGTTC
AACGAACTGG GTCCGCGTTT CGCGACCCGT CCGGGCGGCT ACACCCGCAT CCTGAAGTTC
GGCTTCCGCC AGGGCGACAA TGCGCCGATG GCGCTGGTGG AGCTGCTCGA CCGTCCGGAA
GTTGCCGAGG CTGTGGAAGT CGACGGCGCT GCCGAGTAA
 
Protein sequence
MRHRHGLRKL NRTSSHRLAM LRNMSNSLLQ HELIKTTVPK AKELRKVVEP LITLAKKDTV 
ANRRLAFARL RDRDMVTKLF NELGPRFATR PGGYTRILKF GFRQGDNAPM ALVELLDRPE
VAEAVEVDGA AE