Gene Rpic_3267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3267 
Symbol 
ID6288054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3417282 
End bp3418277 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content65% 
IMG OID642626843 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001900821 
Protein GI187930334 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0833553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAA GCTTCCCCGA TCATCGTCCG CGCCGCATGC GCCGCGACGA TTTCTCCCGC 
CGCATGATGC GCGAGTCGCG CCTCACCGCC GACGACCTGA TCTACCCGGT CTTCATCCTC
GAAGGCACCA ACGTGCGACA GGCCGTGCCG TCGATGCCAG GTGTGGAGCG GGTGTCGGTC
GACGTGCTGC TGAGCGTGGC CGAGCAGTGC GTGCAGCTGG GCGTACCGGT GCTGGCGCTC
TTCCCCGTGA TCGAGCCGTC GCTCAAAACG CCGGATGGTA TCGAGGCCAC CCATGCCGAT
GGCCTGATCC CGCGTGCGGT GAAGGCCCTC AAGGCGCGCT TCCCTGAACT GGGCATCCTG
ACCGATGTGG CGCTCGATCC GTACACGAGT CATGGCCAGG ACGGCGTGCT CGACGCCAAC
GGCTACGTGC TCAACGAAGA GACGGTCGAC ATCCTGATGC GCCAGGCACT GGTGCAGGCC
GAGGCTGGCG TGGACATCGT TGCGCCGTCG GACATGATGG ACGGCCGCAT CGGCGCGATC
CGCTTGGCGC TGGAGAACGA CGACCACACC TACACCCGCA TCATGGCTTA CGCGGCCAAG
TACGCTTCGG CGTTCTACGG CCCGTTCCGT GATGCAGTGG GCTCGGCCGC CAACCTGGGC
AAGAGCAACA AGATGACTTA CCAGATGGAC CCGGCCAACT CGGACGAGGC TCTGCGCGAA
GTGGCACTCG ACATCGCCGA AGGCGCCGAC ATGGTGATGG TCAAGCCCGG CATGCCGTAT
CTCGACATCG TGCGACGCGT GAAGGATGAG TTCCGCTTCC CGACCTACGT CTATCAGGTC
AGTGGTGAAT ACGCGATGCT GAAAGCCGCT GCGCAGAACG GCTGGCTGGA TCACGACAAG
GTCGTGCTGG AGTCGCTGCT GGCGTTCAAG CGCGCCGGCG CGAACGGCAT CCTGACGTAC
TTCGCATTGG ACGCCGCCCG CCTGCTGCGC GCGTAG
 
Protein sequence
MIASFPDHRP RRMRRDDFSR RMMRESRLTA DDLIYPVFIL EGTNVRQAVP SMPGVERVSV 
DVLLSVAEQC VQLGVPVLAL FPVIEPSLKT PDGIEATHAD GLIPRAVKAL KARFPELGIL
TDVALDPYTS HGQDGVLDAN GYVLNEETVD ILMRQALVQA EAGVDIVAPS DMMDGRIGAI
RLALENDDHT YTRIMAYAAK YASAFYGPFR DAVGSAANLG KSNKMTYQMD PANSDEALRE
VALDIAEGAD MVMVKPGMPY LDIVRRVKDE FRFPTYVYQV SGEYAMLKAA AQNGWLDHDK
VVLESLLAFK RAGANGILTY FALDAARLLR A