| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3264 |
|---|
| Symbol | |
|---|
| ID | 6288051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3413197 |
|---|
| End bp | 3415401 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642626840 |
|---|
| Product | ResB family protein |
|---|
| Protein accession | YP_001900818 |
|---|
| Protein GI | 187930331 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1333] ResB protein required for cytochrome c biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.201427 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCGG TCTCCACTTC CGGCGTCCAG ATCCGCTCCC GTCGTCGCGC GTTGCGCGAA
ACGGTCGAGT TGCTGTCGTC GATGCGCTTT GCGATCAGCC TGCTGACGGT GATCGCCATT
GCCAGCGTGA TCGGCACGGT GCTCAAGCAG AACGATCCGT ATCCGAACTA CGTCAACCAA
TTCGGGCCGT TCTGGGCCGA CGTATTCCGA TCGCTGACGC TGCCGACCGT CTATAGCGCG
TGGTGGTTTC TGCTGATCCT GGCGTTCCTG GTGGTGTCGA CCTCGCTGTG CATCGTGCGC
AATGCGCCCA AGATGCTGGC CGACATGCGC GCCTGGCGCG AGAACGTGCG CGAAGGCAGT
CTGCGCGCGT TCCATCACCG GGACGAATTT GATTCCCGCG CCGATACCGC CACCGTGACG
GCACGCTTGG CCGCGCTTGC GCAGAACCGA GGTTTCCGCA TCAAGGCGTT CGCGCGCGAG
GGTGGAGCGA CGCTCATCGC GGCAAAGGCG GGAGCGGGCA ACAAGATCGG CTACATCCTG
GCGCACACGG CCATCGTCGT GATCTGCATC GGCGGCTTGC TGGATGGCGA CATGATGATC
CGCGCGCAGA TGTGGTTTGG TGGCAAGTCG CCCATCAAGG GCAACGCGGT CATCAGCGAC
ATCGGCCCGG AGCATCGGCT GTCGACATCG AACCCGGGGT TCCGCGGCAA CGCCTTCGTG
CCGGAAGGTT CGACGGTCAG CACGGCGATC CTGAACATTG CCGATGGCGC GCTGATCCAG
GACCTGCCGT TCATGATCAC GCTCAAGAAG TTCACCGTCG AGCATTACTC GACCGGCATG
CCCAAGCTGT TCGCCAGCGA CATCGTCGTG ACTGACCGCC GCACCGGCAA GCAGACCGCT
GCGCGCGTGG AGGTGAACAA GCCGTTCGTG TATGACGGCG TGGCGATCTA CCAGTCGAGC
TTTGAAGATG GCGGCTCGAA GCTCAAGCTG ACCGGCTACC CGATGCACGG TGACAACGCC
AAGACGTTCG ACATGTCGGG CGTCGTGGGC GAAAGCTCGA AGCTCACCGG CAAGAGCGGC
GACTACACGG TCGAGTTCTC CGACTTCCGC CTGATGAATG TCGAAACGGT GACGGACGCC
TCGGGCAAGC AGGACGCACG CGGTGTCGGC AAGAGGGGCG GTGCGGAAAA TGGTCTGCGC
GCGGAGCTTG GCAACGTCAC CAAGATGACG CGCGACCGCG ATCTGCGCAA CGTCGGCCCC
TCCGTGCAGT ACAAGCTGCG CGACGCCAAC GGCCAGGCAC ACGAGTTCAG CAACTACATG
CTGCCCGTCA CGCTGGACGG GCAATCGGTG TTCCTGGCCG GCATGCGCTC GCAGCCGGAC
GAGCCGTTCC GCTATCTGCG CATTCCCGCC GATGCGCAAG GCACCGTCGC CGACTGGATG
CGCCTGCGCG CCGCGCTGCA GAATCCAGCG ATGCGCGGCG AGGCAGCGCG CCGGTTTGCG
CTGCTCTCCA TGCCCGGCGA GCAGCGCGCG GAACTGCGCA ACCAGTTGAT GGAAAGCGCT
CGTCGCGCGC TCGACCTCTT TGCCGGCGCT GCCGATGTCA AGGACGGTAC CGCCGGTGCA
CAGGGCGGCT TTGCCGCAGT CGCCACGTTC TTGCAGAAAT CGGTGCCTGA GGGTGAGCGT
GAGAAGGCGG CCGATGTGCT GATGAAAATC ATCAACAGCT CCATGTGGGA ACTGTGGCAA
CTGGCCCGCG CACAGGATGG CCTGCCTGCA CCCACGGTGG ATGCGGCCAG CAGCCAGTGG
TTGCAGAGCG CCATCAACGC GCTGTCGGAC AACGTCTTCT ACGGCGCACC CGTATATCTG
CAGCTGACCG ACTTCCAGCA GGTGCAGGCC AGCGTGTTCC AGCTCACACG TGCGCCGGGC
AAAAACATCG TGTATCTTGG GTCGCTGCTG CTGGTGCTGG GCGTGTTTTC GATGTTCTAC
GTGCGAGAGC GCCGCTGGTG GCTGTGGATC CGACCGCAAT CCGGTCCGGC CAACGAAAGC
GCCTCCGGCG CACATGTGCT GACCGCCATG TCGACCATGC GCCGCACGCT TGACTTCGAC
CGCGAGTTCG AGCGCCTCAA GCACGATATC CGCGCCGCGG CAGGTGCCCA AGCCGCCCCC
GATGCCGCCA GTGCAGCGAG CGTCGACCCC AAACCAACGA AGTGA
|
|---|
| Protein sequence | MSSVSTSGVQ IRSRRRALRE TVELLSSMRF AISLLTVIAI ASVIGTVLKQ NDPYPNYVNQ
FGPFWADVFR SLTLPTVYSA WWFLLILAFL VVSTSLCIVR NAPKMLADMR AWRENVREGS
LRAFHHRDEF DSRADTATVT ARLAALAQNR GFRIKAFARE GGATLIAAKA GAGNKIGYIL
AHTAIVVICI GGLLDGDMMI RAQMWFGGKS PIKGNAVISD IGPEHRLSTS NPGFRGNAFV
PEGSTVSTAI LNIADGALIQ DLPFMITLKK FTVEHYSTGM PKLFASDIVV TDRRTGKQTA
ARVEVNKPFV YDGVAIYQSS FEDGGSKLKL TGYPMHGDNA KTFDMSGVVG ESSKLTGKSG
DYTVEFSDFR LMNVETVTDA SGKQDARGVG KRGGAENGLR AELGNVTKMT RDRDLRNVGP
SVQYKLRDAN GQAHEFSNYM LPVTLDGQSV FLAGMRSQPD EPFRYLRIPA DAQGTVADWM
RLRAALQNPA MRGEAARRFA LLSMPGEQRA ELRNQLMESA RRALDLFAGA ADVKDGTAGA
QGGFAAVATF LQKSVPEGER EKAADVLMKI INSSMWELWQ LARAQDGLPA PTVDAASSQW
LQSAINALSD NVFYGAPVYL QLTDFQQVQA SVFQLTRAPG KNIVYLGSLL LVLGVFSMFY
VRERRWWLWI RPQSGPANES ASGAHVLTAM STMRRTLDFD REFERLKHDI RAAAGAQAAP
DAASAASVDP KPTK
|
|---|
| |