| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3257 |
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| Symbol | |
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| ID | 6287889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3406911 |
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| End bp | 3408182 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642626833 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001900811 |
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| Protein GI | 187930324 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.314031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCAC TCATGTCCGA GTCCCTGATC CGCCAGGAAG GCGCGCTGAT GATCGAAGGC
GTCGCGCTCG ACGCGATTGC TGCGCAGTTC GGCACGCCCA CCTATGTGTA CTCGCGCGCC
GCGCTCACGG CCAACTATCG CGCCTACGCC GCCGCCTGCG AGGGCCGCAA CGCGCATGTG
CAGTACGCCA TGAAAGCCAA CTCGAACCTG GCCGTGCTGC AGGTGTTCGC ACAGCTTGGC
GCGGGCTTTG ACATCGTGTC CGCCGGCGAA CTCAAGCGCG TGCTGCGCGC CGGTGCGCCG
GCCTCGAAGG TGGTGTTCTC GGGCGTTGGC AAAAGCGCGG ACGAAATGCG CTTCGCGCTG
GAAGTCGGCG TGGCGTGCTT CAACGTGGAG TCGATTCCCG AACTGCACCG CCTGAACGAT
GTGGCGGCCT CGATGGGCAA GGTCGCGCCC GTGTCGCTGC GCATCAACCC GGACGTCGAT
GCCAAGACGC ACCCGTACAT CTCGACGGGT CTGAAGGGCA ACAAGTTTGG CGTGGCGTTT
GACGAAGTGC TGCCGACCTA CCGCGCGGCC GCCGCGATGC CGAACCTGCA CGTGGTCGGC
ATCGACTGCC ATATCGGCTC GCAGATCACC GAGGTGTCGC CGTATCTGGA TGCGCTGGAC
AAGGTGCTCG ATGTAGTGAC GCAGCTGGAC GCCGAGGGCA TTCACCTGTC GCACATCGAT
GTGGGCGGCG GTCTTGGTAT CACCTACACG GACGAGACGC CGCCGGACAT CACCGCCTTC
GCGCGCACAC TCCTGGACCG CGTCGAGCAG CGCGGTTTTG GCGATCGCAC CGTGCTGTTC
GAGCCGGGCC GGTCGCTGGT GGGCAACGCC GGCCTGCTGC TCACGCGCGT CGAGTACCTC
AAGCCTGGCG CCAGCAAGAA CTTCTGCATC GTCGATGCGG CCATGAATGA CCTGGCCCGC
CCGGCGATGT ACGAGGCGTA TCACCACATC GTGCCGGTGC GTGAAAGCCA AAGCGCGCCG
GTCGTCTACG ACGTGGTGGG CCCGGTGTGC GAATCCGGCG ACTGGCTGGG CCGCGACCGT
TCGCTGGCGG TGCAGCCGGG CGACGTGCTC GCGATCCTGT CAGCCGGCGC GTACGGCTTC
ACGATGAGCT CAAACTACAA CACGCGCAAT CGCGCGGCCG AGGTCATCGT CGATGGCGAC
AAAATCCATC TGGCGCGCGA GCGCGAGTGC TTTGAAGACC TGATCCGCGG CGAGCATCTG
TTCCCGGCGT AA
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| Protein sequence | MFPLMSESLI RQEGALMIEG VALDAIAAQF GTPTYVYSRA ALTANYRAYA AACEGRNAHV
QYAMKANSNL AVLQVFAQLG AGFDIVSAGE LKRVLRAGAP ASKVVFSGVG KSADEMRFAL
EVGVACFNVE SIPELHRLND VAASMGKVAP VSLRINPDVD AKTHPYISTG LKGNKFGVAF
DEVLPTYRAA AAMPNLHVVG IDCHIGSQIT EVSPYLDALD KVLDVVTQLD AEGIHLSHID
VGGGLGITYT DETPPDITAF ARTLLDRVEQ RGFGDRTVLF EPGRSLVGNA GLLLTRVEYL
KPGASKNFCI VDAAMNDLAR PAMYEAYHHI VPVRESQSAP VVYDVVGPVC ESGDWLGRDR
SLAVQPGDVL AILSAGAYGF TMSSNYNTRN RAAEVIVDGD KIHLAREREC FEDLIRGEHL
FPA
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