| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3254 |
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| Symbol | |
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| ID | 6288511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3403740 |
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| End bp | 3406073 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642626830 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_001900808 |
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| Protein GI | 187930321 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0272171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGCC TGTTCGTTGC CATGGGGGTC GTCGGGGCGC TGCTGCTGGG CTATGCCCTG
CTCGTCGCCG CGCCCAACCT GCCGTCGCTC GACGCCATCA CCGATTACCG CCCGAAGATT
CCGCTGCGCG TGTACACCGC CGACAACGTC CTCATCGGCG AATTCGGTGA AGAGCGCCGC
AGCTTCGTGC CGATCGCGCA GATGCCCGAC GTGATGAAGC GCGCGGTGCT GGCCATCGAG
GATGACCGTT TCTACGAGCA CGGCGGCGTC GACTTCATCG GCGTGCTGCG CGCGGGGCTG
GCGAATCTGC ACGGCGGCCT GTCGCAAGGC GCGTCGACCA TCACGATGCA GGTGGCACGC
AACTTCTTCC TGTCGAGCGA GAAGACATAC ACGCGCAAGA TCTACGAGAT ACTGCTTTCG
TACAAGATCG AGGCGAGCCT CACAAAGGAT CAGATCCTTG AGCTGTACAT GAACCAGATC
TACCTGGGCC AGCGTGCATA CGGCTTTGCC AGCGCCGAGC AGATCTACTT CGGCAAGAAC
ATCAAGGACA TCACCCTGGC CGAAGCAGCC ATGCTGGCGG GCCTGCCCAA GGCGCCATCG
GCGTACAACC CCGTGGTGAA CCCGAAGCGC GCCAAGGTGC GTCAGGAGTA CATCCTGCAA
CGCATGCGTG ACCTGCACTA CATCACCCCG GAACAGTACA CCCAGGCCGT CAACGAGCAA
CTGCCGGTGC GCGGCGAAGG CCATGAATTC GACGTGCACG CCGAATACGT CGCCGAAATG
GTGCGCCAAC TCATGTATGC GCAATACCGC GAGGAAACCT ATACGCGCGG CCTGAACGTC
TACACGACGC TGCGCAAGGC CGATCAGGAC GTTGCGTATC AATCCGTGCG TCGCGGCATT
CTCGATTACG AGCGCCGTCA CGGTTATCGC GGCCCTGAAG CGTTCATCGA CCTGCCCTCC
GATGCGGAAG AGCGCGAACA GGCCATCGAC GACGCCTTGC TCGAGCACCC GAACAGCGAC
GATCTGCAAT CGGCCGTGGT GGTGAGCGTG TCACCCAAGC TGGTGCGCGC GACGATGCTG
ACCGGTGAGA CGATCGACCT GGCCGGCGAC GGCCTGCGCT TTGCACAGGC GGCCCTGTCG
AACAATGCAC AGCCCAAGAT CAAGCTGCGC CCAGGTGCGG TGATCCGCGT GATCGAGGAC
ACGAAGACGC AGAAGTGGTC CATCACGCAG TTGCCGGAAG TGGCGTCGGG CTTCATCTCG
CTGGACCCGC AGACGGGCGC GATCTACTCC ATGGTTGGCG GCTTTGATTT CAATCGCAGC
AAGTTCAACC ACGTCACGCA GGCGTGGCGC CAGCCGGGTT CGAGCTTCAA GCCGTTCATC
TACTCGGCGG CGGTGGACAA GGGTTTCTCG CCGTCTACGG TCATCAACGA CGCGCCGCTC
TCGATCCCGA CCGGCGATAC CGGCGGGCAG GTGTGGGAGC CGAAGAACTA CGGCGGCGGC
TATGACGGCC CGATGACGAT GCGCCGCGCG CTGCAAAAGT CGAAGAACCT GGTGTCGGTG
CGGATCCTGC GCGCGATTGG TACGCAGTAC GCGCAGCAGT ACATCACCCG CTTCGGCTTC
GACGCCGATC GGCACCCGGC CTATCTGCCG ATGGCGCTGG GCGCAGGCTC GGTGACGATG
CTGCAGATGG CGAGCGGCTA CTCGGTGTTC GCCAACGGCG GCTACCGCGT GAACCCGTAC
ATCATCGATC GCGTGGTGGA TGCGCGCGGC ACGGTCGTGC AGCAAAGCCA TCCGATGACC
GCCGGCAAGG ACGCCGTGCG CGTGATCGAT CCGCGCAACG ATTTCATCAT GGATTCACTG
CTGCGCAGCG TGGTGTCGAA CGGCACGGGC TACCAGGCCA AGGTCAAGCT GGGCCGCAAC
GACATGGCTG GCAAGACCGG CACCACCAAC GACTCGTTCG ACGCCTGGTT TTGCGGCTAC
ACGCCCAAGC TGGTCGGCGT GGCCTGGATG GGCTACGACA ACCCGCGCAG CCTGGGGGAT
CGCGAAACCG GTGGCGGCCT GGCCCTGCCG ATCTGGATCA ACTACATGAG CTACGCGCTC
AAGGGCGAAC CCCAGACCGA GCGCCAGCCG CCCGAAGGCG TCGTGCAGAT GGCCGGCGAC
TGGGCTTACG AGGAATACGC CAACGGCCAG GGCGTGGCCT CGGTTGGCCT GGGCGATGCG
ATGCCGGGAG GCTCCGCACC GGCCGGCGAT CAATCGCAAC AGCCGGGCAT CAACCTGGCG
CCGACGCAGG AGCAGGAGAA GCAGAAGATT CTCGACATGT TCCGCGGCAA CTGA
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| Protein sequence | MLGLFVAMGV VGALLLGYAL LVAAPNLPSL DAITDYRPKI PLRVYTADNV LIGEFGEERR
SFVPIAQMPD VMKRAVLAIE DDRFYEHGGV DFIGVLRAGL ANLHGGLSQG ASTITMQVAR
NFFLSSEKTY TRKIYEILLS YKIEASLTKD QILELYMNQI YLGQRAYGFA SAEQIYFGKN
IKDITLAEAA MLAGLPKAPS AYNPVVNPKR AKVRQEYILQ RMRDLHYITP EQYTQAVNEQ
LPVRGEGHEF DVHAEYVAEM VRQLMYAQYR EETYTRGLNV YTTLRKADQD VAYQSVRRGI
LDYERRHGYR GPEAFIDLPS DAEEREQAID DALLEHPNSD DLQSAVVVSV SPKLVRATML
TGETIDLAGD GLRFAQAALS NNAQPKIKLR PGAVIRVIED TKTQKWSITQ LPEVASGFIS
LDPQTGAIYS MVGGFDFNRS KFNHVTQAWR QPGSSFKPFI YSAAVDKGFS PSTVINDAPL
SIPTGDTGGQ VWEPKNYGGG YDGPMTMRRA LQKSKNLVSV RILRAIGTQY AQQYITRFGF
DADRHPAYLP MALGAGSVTM LQMASGYSVF ANGGYRVNPY IIDRVVDARG TVVQQSHPMT
AGKDAVRVID PRNDFIMDSL LRSVVSNGTG YQAKVKLGRN DMAGKTGTTN DSFDAWFCGY
TPKLVGVAWM GYDNPRSLGD RETGGGLALP IWINYMSYAL KGEPQTERQP PEGVVQMAGD
WAYEEYANGQ GVASVGLGDA MPGGSAPAGD QSQQPGINLA PTQEQEKQKI LDMFRGN
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