| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3253 |
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| Symbol | |
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| ID | 6288510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3402136 |
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| End bp | 3403221 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642626829 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_001900807 |
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| Protein GI | 187930320 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGACGGG GTTTGTTGTC CGGCCTGCTG CGCCGCAATA TCGTCGGGAT AGATATCGGG
TCTTCCAGCG TCAAGGTGGT GGAGTTGTCC GCCAACGGCA AGCAGGGGGA TTTCCGTCTC
GAAAAGTGCG CCAGCGAGCT GATTGAACGC AGTGCCGTCG CTGACGGCAA TCTGGTGAAT
ATCGATGCGG TGGGCAATGC GCTCAAGCGC GCCATCGCCA AGGCTGGCAT TCGCGGTAAG
GAAGCCGTGC TTGCCATTCC TGCAAGCCTG ACGGAATCGC AAACCGTCAG CCTGCCCGAC
AACCTGACCG AAGACGAGCT CTTCGTGCAG GTCGAGAGCG AAGCCAACCG GCTGTTTCCG
CCCTCGCAGA ACGTCAATTT CGACTATGTC GTGATCGGCC CGTCCGAAAC CGAAGGCGGG
ATCGGCGTGC GCGTGACGGC AACGGTTTCC GAGCGCGTGA CCGAGCGCGT GACCGCCGCC
GAGATGGCCG GTCTGAAAGC GATCGTCATG GACGTGGAAG AGAACGCCAT CCAGCGGGCC
ATGACGCACA TGCTGGCGGT CAAGCCGGAC GCCAGCGAAA TTGAAACGCG CGACATGCCC
GTCGTGGCGA TGTTCCACTT GGGTGGTGCG CGCTCGCACG CACTGTTCTA CCAAGGCTGG
AAGGAGCTGT ACGAGCAGCC GATGTCCGGC TCGGGCGACC AGCTCACGCA AAGCATCTCG
CGCCTGTTTT CCCTCGACCT GCTCAAGGCC GAGGTAAAGA AGCGCAAGAA CACGCTGCCC
GACGAATACC GCAGCCAGCT GCTCAAGCCT TCGCTCGAGA CGCTGGCCAT GGAGGTCGGC
CAGGCGATTC AGAATTTCCT GTCGACGTCG AGCGTCGGCC GCGTGGACGA GATCGTGCTC
TCGGGCGGTC ACGCATCGTT GCTGGGCGTG CAGACCGCCA TCCAGCAGCA GACGCAGATC
AATACGACGC TGGCCAACCC GTTCGCCAAC ATGGGCGCGG CCAAGAACGT CAACGCGCGC
TATCTGCAGC GCGATCTGCC GGCCTACATC GTCAGCGCGG GCCTTGCCCT GCGCGGGCTG
CAATAA
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| Protein sequence | MRRGLLSGLL RRNIVGIDIG SSSVKVVELS ANGKQGDFRL EKCASELIER SAVADGNLVN
IDAVGNALKR AIAKAGIRGK EAVLAIPASL TESQTVSLPD NLTEDELFVQ VESEANRLFP
PSQNVNFDYV VIGPSETEGG IGVRVTATVS ERVTERVTAA EMAGLKAIVM DVEENAIQRA
MTHMLAVKPD ASEIETRDMP VVAMFHLGGA RSHALFYQGW KELYEQPMSG SGDQLTQSIS
RLFSLDLLKA EVKKRKNTLP DEYRSQLLKP SLETLAMEVG QAIQNFLSTS SVGRVDEIVL
SGGHASLLGV QTAIQQQTQI NTTLANPFAN MGAAKNVNAR YLQRDLPAYI VSAGLALRGL
Q
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