Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3248 |
Symbol | aroK |
ID | 6287133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3397416 |
End bp | 3397955 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642626824 |
Product | shikimate kinase |
Protein accession | YP_001900802 |
Protein GI | 187930315 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCGG GCAAGACCAC GGTCGGCCGG GCGGTGGCGC GTCGGCTCGA TCTGCCGTTC TTCGACTCCG ACCATGAGAT CGAAGCCCGC TGCGGCGTGC GCGTGCCAAT CATCTTCGAG CACGAGGGCG AAGTGGGCTT CCGCGACCGC GAAACCCACA TGATCGACGA ACTCACCTCG CGCGATGGCG TGGTCGTCGC CACCGGCGGC GGAGCCGTGC TGCGGGCGGA GAACCGCGCG TTCCTCCGTG AACGCGGCAC TGTGATCTAC CTGCGCGCCA ATCCGCATGA CCTGTATCTG CGCACGCGTC ACGACAAGAA CCGGCCGCTG CTGCAGACCG AAAACCCGCG TGCCAAGCTG GAAGAACTGC ATGCGGTTCG TGACCCCCTA TATCGTGACG TGGCGCACTT CGTCATCGAA ACCGGAAAGC CCACCGTCGC CCAGCTTGTT AATATGGTGC TGATGCAACT CGAGGTGGCT GGCATTGTCG TACCGCCCGC AGGCGCCTCC ACTTCCTCGC AAGTCTCTCC TCAGTCATGA
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Protein sequence | MGAGKTTVGR AVARRLDLPF FDSDHEIEAR CGVRVPIIFE HEGEVGFRDR ETHMIDELTS RDGVVVATGG GAVLRAENRA FLRERGTVIY LRANPHDLYL RTRHDKNRPL LQTENPRAKL EELHAVRDPL YRDVAHFVIE TGKPTVAQLV NMVLMQLEVA GIVVPPAGAS TSSQVSPQS
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