Gene Rpic_3248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3248 
SymbolaroK 
ID6287133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3397416 
End bp3397955 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID642626824 
Productshikimate kinase 
Protein accessionYP_001900802 
Protein GI187930315 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGG GCAAGACCAC GGTCGGCCGG GCGGTGGCGC GTCGGCTCGA TCTGCCGTTC 
TTCGACTCCG ACCATGAGAT CGAAGCCCGC TGCGGCGTGC GCGTGCCAAT CATCTTCGAG
CACGAGGGCG AAGTGGGCTT CCGCGACCGC GAAACCCACA TGATCGACGA ACTCACCTCG
CGCGATGGCG TGGTCGTCGC CACCGGCGGC GGAGCCGTGC TGCGGGCGGA GAACCGCGCG
TTCCTCCGTG AACGCGGCAC TGTGATCTAC CTGCGCGCCA ATCCGCATGA CCTGTATCTG
CGCACGCGTC ACGACAAGAA CCGGCCGCTG CTGCAGACCG AAAACCCGCG TGCCAAGCTG
GAAGAACTGC ATGCGGTTCG TGACCCCCTA TATCGTGACG TGGCGCACTT CGTCATCGAA
ACCGGAAAGC CCACCGTCGC CCAGCTTGTT AATATGGTGC TGATGCAACT CGAGGTGGCT
GGCATTGTCG TACCGCCCGC AGGCGCCTCC ACTTCCTCGC AAGTCTCTCC TCAGTCATGA
 
Protein sequence
MGAGKTTVGR AVARRLDLPF FDSDHEIEAR CGVRVPIIFE HEGEVGFRDR ETHMIDELTS 
RDGVVVATGG GAVLRAENRA FLRERGTVIY LRANPHDLYL RTRHDKNRPL LQTENPRAKL
EELHAVRDPL YRDVAHFVIE TGKPTVAQLV NMVLMQLEVA GIVVPPAGAS TSSQVSPQS