Gene Rpic_3244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3244 
Symbol 
ID6288291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3393257 
End bp3393982 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID642626820 
Productprotein of unknown function DUF1568 
Protein accessionYP_001900798 
Protein GI187930311 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC TGCCCCGCCT CAGTCCCACC GATGTCCCTG TGCATGTGTT GCAGCGCGGC 
AACAATCGCC AGACCGTCTT TCGCGGCGAC GACGACTACG CGTTCTACCT CGACACGTTG
CGCATGGCTG CCCGTGAGCA TGACTTCGCC ATCCATGGTT TCTCGCTGAT GCCGAATCAC
GTCCATCTGG TCGGAACGCC CAAGGTGGCG GAGAGCCTTT CGCGCACGCT GCAGGCCGTC
GGGCGGCGCT ATACGCGGTA CTTCAACGCA GCCGCTGATC GCAGCGGAAC GCTGTGGGAA
GGGCGTTTCC GCTCGACCGT ACTGGACCCG GCTGAATGGG TGCTGCCGAT CCTGTTGTAT
GTGGAATCCA ACGCCGTACG CGCTGGCCTC GTCAGCACGC CAGAAGACGA CCGTTGGAGC
ACATATCGTC ATCATGTGGG CATCCAATCC ATCCCGTGGG TGAGTGATCA CTATTGCTAT
TGGCGTCTTG GTAACACGCC TTTCGAGCGC CAGTCGCGCT ACCGAACGTT GTGGCACGAA
GGTTTGGGCT CCGACCAGCT CGCGCAGATT CGCCAGCATG TGCACAGCGG CTGGCCGCTC
GGCAACGAGG CGTTTCTCGC GACACTTGCG CGCACCGGAG GCCGTCGCGT TGCGCCATTG
CCCAAGGGGC GCCCCCCTCG CCAACCCGCT GAAGTGGGAA CGGAGGACAG CGCGCGCTCC
GAATAG
 
Protein sequence
MARLPRLSPT DVPVHVLQRG NNRQTVFRGD DDYAFYLDTL RMAAREHDFA IHGFSLMPNH 
VHLVGTPKVA ESLSRTLQAV GRRYTRYFNA AADRSGTLWE GRFRSTVLDP AEWVLPILLY
VESNAVRAGL VSTPEDDRWS TYRHHVGIQS IPWVSDHYCY WRLGNTPFER QSRYRTLWHE
GLGSDQLAQI RQHVHSGWPL GNEAFLATLA RTGGRRVAPL PKGRPPRQPA EVGTEDSARS
E