Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3243 |
Symbol | |
ID | 6289020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3388275 |
End bp | 3393074 |
Gene Length | 4800 bp |
Protein Length | 1599 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642626819 |
Product | Glutamate synthase (ferredoxin) |
Protein accession | YP_001900797 |
Protein GI | 187930310 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCTGTCT GCCACCGCAT CCGCACCATC GCGAGGGCCT TCTACGGCGC GCTGTACCCA CAACATCGGA AGATCGCCGT GGAACAACAT TCCTTCCCCA TCACGCCGTC GGCGCCGTCG GCCCAGGGTC TGTACGACCC GACCAATGAA CACGACGCTT GCGGCGTCGG CTTCGTCGCC CATATCAAGG GCAAGAAGAG CCACGAGATC GTCCAGCAAG GCTTGCGCAT CCTGCACAAC CTCGACCATC GCGGCGCCGT CGGCGCTGAC CCGCTGATGG GTGATGGCGC GGGCATCCTG CTGCAGATTC CCGACCAGTT CTTCCGCGAA GAAATGGCCA AGCAGGGCAT CAACCTGCCG CCGGCGGGCG AATACGGCGT CGGCATGATC TTCCTGCCGA AAGAACACGC GTCGCGCCTG GCCTGCGAAC AGGAGTTGGA ACGCACCGTG CGCCTGGAAG GCCAGGTCGT GCTGGGCTGG CGCGATGTGT CGGTCGACAA GACCATGCCG ATGTCGCCCA CGGTGCAGAA GACTGAGCCG GTGATCCGCC AGATCTTCAT CGGGCGCGGT CGCGACATCA TGACCACCGA TGCGCTGGAG CGGAAGCTGT ATGTGATTCG CAAGACCGCA AGCCACGCCA TCCAGGCGCT CAAGCTCAAG CATGGCAAGG AATACTTCGT GCCGTCGATG TCGGCGCGCA CGATCGTCTA CAAGGGCCTG CTGCTGTGCG AACAGGTCGG CCGCTACTAC CAGGATTTGG CAGACCCGCG TACGGTGTCG GCGCTGGCGC TGGTGCACCA GCGTTTCTCG ACCAACACGT TCCCCGCATG GGAGCTGGCG CACCCGTACC GCATGGTTGC GCACAACGGC GAAATCAACA CCGTCAAGGG CAACGTCAAC TGGATCAACG CGCGTACGGG CGGCATCTCG TCGCCGGTGC TGGGCGATGA CCTGCCCAAG CTGTGGCCGC TGATCTATCC GGGTCAATCG GATACCGCAT CGTTCGACAA CTGCCTCGAA CTGCTGACGA TGGCCGGCTA CCCGCTGGCC CAGGCAATGA TGATGATGAT TCCGGAAGCG TGGGAACAGC ACACGCTGAT GGACGACAAC CGCCGCGCGT TCTACGAATA CCACGCCGCA ATGATGGAGC CGTGGGACGG CCCCGCAGCC ATCTGCTTTA CCGATGGTCG CCAGATCGGC GCGACGCTCG ACCGTAACGG CCTGCGCCCG GCGCGTTATT ACGTCACCGA CGACGACATG GTCGTGATGG CATCCGAGGC CGGCGTGCTG CCGATCCCCG AGTCGCGCAT CGTCAAGAAG TGGCGTCTGC AGCCGGGCAA GATGTTCCTG ATCGACATGG AGCAGGGCCG CATCATCGAC GACAAGGAAC TCAAGGACAA CCTGGCCAAC GCCAAGCCGT ACAAGAGCTG GATCGATGCC GTGCGCATCA AGCTCGACGA GCTGGACGCG AAGCCCGAAG ACGTGGCCGC CGAAACCAAG CCGGCCGCCA AGCTGCTGGA TCGCCAGCAG GCCTTCGCCT ACACGCAGGA AGACGTCAAG TTCCTGATGG CGCCGATGGC CGCCAACGGC GAAGAAGCCG CCGGATCTAT GGGCAACGAC AGCCCGCTGG CCGTGCTGTC CTCGAAGAAC AAGACGCTCT ACAACTACTT CAAGCAACTG TTCGCGCAGG TCACGAACCC GCCGATCGAC CCGATCCGCG AAAACGTGGT GATGTCGCTC GTCTCGTTCA TCGGGCCGAA GCCGAACCTG CTTGAGCTGA ACAACATCAA CCCGCCGATG CGCCTTGAAG TGAGCCAGCC CGTGCTGGAC TTCAAGGACA TGGCGAAGAT CCGCAACATC GAGCACTACA CCGGCGGCAA GTTCATGGCT TACGAGCTGG ACATCTGCTA TCCGGTGGCG TGGGGCAAGG AAGGCATCGA AGCGCGCCTG GCTTCGCTGT GCGCCGAGGC TGTCGATGCG GTCAAGTCGG GCTACAACAT CCTGATCGTT TCGGACCGCG CGGTCGACGA GAAGCAGGCC GCGATTCCGG CGCTGCTGGC CACGTCCGCC ATCCACCATC ACCTAGTGGA CAAGGGCTTG CGCACGAGCA CGGGTCTGGT CGTCGAAACG GGCTCGGCCC GCGAAGTGCA CCACTTCGCG CTGCTGGCCG GCTATGGCGC AGAAGCCGTG CACCCGTATC TGGCGATGGA GACGCTGGCC GAATTGGCGC CGGGCCTGGG CCTGACCGCC GAGAAGGCCA TCTACAACTT CACCAAGGCG ATCGGCAAGG GCCTGCACAA GGTGATGTCC AAGATGGGCA TCTCGACGTA CATGTCGTAC ACCGGCGCGC AGATCTTCGA AGCGATCGGC CTGTCGCGCG AACTGGTCGA CAAGTACTTC CAGGGCACCG CATCCAACGT GGGCGGCATC GGCATCTTCG AGGTGGCTGA AGAGGCGCTG CGCCTGCACC GCGATGCCTT TGGCGATGCA CCGGTGCTGG CGAACATGCT CGACGCGGGC GGCGAATACG CCTACCGCGT CCGCGGCGAA GAGCACATGT GGACGCCGGA TTCGATCGCC AAGCTGCAGC ACGCGACGCG CGCGAATTCG TACCAGACGT ACAAGGAATA CGCGAACCTG ATCAACGACC AGAGCAAGCG CCACATGACG CTGCGCGGCC TGTTCGAGTT CAAGGTGGAT CCGGCACGCG CGATTCCGCT GGAGGAAGTC GAACCGGCCA AGGAGATCGT CAAGCGCTTT GCTACCGGCG CCATGTCGCT GGGTTCGATC AGCACGGAAG CGCACACCAC GCTGGCCGTG GCGATGAACC GCATCGGCGG CAAGTCGAAC ACGGGCGAAG GCGGTGAAGA CGAGCGCCGT TACCGCAACG AACTGCGCGG CATTCCCATC AAGCAGGGCA CCAAGCTGTC GGATGTGATC GGCCGCGAAG TGGTCGAGCG CGATCTGGAA CTGCAAGAGG GCGATTCCCT GCGCTCGAAA ATCAAGCAGG TAGCCTCGGG CCGCTTTGGC GTGACGGCCG AGTACCTGGC TTCAGCTGAT CAGATCCAGA TCAAGATGGC GCAGGGCGCC AAGCCCGGCG AGGGCGGTCA ACTGCCCGGC CACAAGGTGA CGGATTACAT CGGCAAGCTG CGTTATGCAG TGCCGGGCGT GGGCCTGATC TCGCCGCCGC CGCACCACGA CATCTATTCG ATTGAAGATC TGGCACAGCT CATCCATGAC CTGAAGAATG TGAACCCGCG TTCGGACGTG TCGGTCAAGC TGGTGTCGGA AGTGGGCGTC GGCACGGTGG CGGCCGGTGT CGCCAAGGCC AAGGCAGACC ACGTGGTGAT CGCAGGCCAT GACGGCGGTA CGGGCGCTTC GCCATGGTCG TCGATCAAGC ATGCCGGCAC GCCGTGGGAG CTGGGCCTGG CCGAGACGCA GCAGACGCTG ATGCTCAACG GCCTGCGCAA CCGTATCCGC GTGCAGGCTG ACGGCCAGAT GAAGACCGGC CGTGACGTCG TGATCGGCGC GCTGCTGGGC GCCGACGAAT TCGGCTTTGC GACCGCACCG CTGGTGGTCG AAGGCTGCAT CATGATGCGC AAGTGCCATC TGAACACCTG CCCGGTGGGT GTGGCGACGC AGGATCCGGT GCTGCGCAAG AAGTTCTCGG GCAAGCCCGA GCACGTGGTG AACTACTTCT TCTTCGTGGC CGAGGAAGTG CGCGAAATCA TGGCGCAACT GGGCATCCGC ACGTTCAACG AACTGATCGG CCGCGCAGAT CTGCTCGACA CGAAGTCCGG CATCGAACAC TGGAAGGCCC GCGGCCTGGA CTTCGCGCGC ATCTTCTACC AGCCGGCCAA GAAGGAAGGC GAGCCGTGCT ACCAGGTCGA TGTGCAAGAC CACGGTCTGG ATCGTGCACT GGATCACCAG CTCATCGAGA AGTCCAAGGC TGCGCTGGAG AAAGGCGAGC GTGTTTCGTT CATCCAGCCG GTGCGCAACG TCAACCGCAC GGTCGGCGCG ATGCTCTCGG GCGAAGTCGC CAAGCGTTAT GGCCACGAAG GTCTGCCTGA TGATTCGATC CACGTGCAGA TGCAGGGCAC GGCCGGCCAG TCGTTCGGCG CGTTCCTGGC GCATGGCATC ACGCTGGACC TGGTGGGTGA CGGCAACGAC TACGTGGGCA AGGGCCTGTC GGGCGGCCGC GTGATCGTAC GCCCGCCGCA CGAATTCCGT GGCGAGCCGA CCAACAACAT CATCGTCGGC AACACCGTGC TGTACGGCGC GCTGGCTGGT GAGGCGTTCT TCAACGGCGT GGCCGGCGAG CGCTTCGCGG TGCGCAACTC CGGCGCCACC ACGGTGGTGG AAGGCACGGG CGACCACGGC TGTGAATACA TGACCGGCGG CACGGTTGTC GTGCTCGGTG CCACCGGCCG CAACTTCGCG GCAGGCATGT CGGGTGGCGT CGCCTACGTC TATGACGAAG ACGGCCTGTT CGACAAGCGC TGCAACACGG CGCAGGTCGC CCTGGAATCC GTGCTGTCGG CGGCTGACCA GGAGAAGGCA CATACCCCGT CGACCTGGCA CAAGGTGAAC GGCGAGCGCG TGCTCGACGA GCAACTGCTC AAGGCGCTGG TGGAAAAGCA CTTCCGCTAC ACCGGCTCCG AGCGTGCCAA GGAACTGCTG GCCGACTGGA ACAACGCCCG TCGCCGCTTC GTCAAGGTCT TCCCGACCGA GTACAAGCGG GCGCTGGCCG AGATGTACGA ACGCGAACAG GAAGCCGGCC GCGAACAGAT CGCTGCCTGA
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Protein sequence | MPVCHRIRTI ARAFYGALYP QHRKIAVEQH SFPITPSAPS AQGLYDPTNE HDACGVGFVA HIKGKKSHEI VQQGLRILHN LDHRGAVGAD PLMGDGAGIL LQIPDQFFRE EMAKQGINLP PAGEYGVGMI FLPKEHASRL ACEQELERTV RLEGQVVLGW RDVSVDKTMP MSPTVQKTEP VIRQIFIGRG RDIMTTDALE RKLYVIRKTA SHAIQALKLK HGKEYFVPSM SARTIVYKGL LLCEQVGRYY QDLADPRTVS ALALVHQRFS TNTFPAWELA HPYRMVAHNG EINTVKGNVN WINARTGGIS SPVLGDDLPK LWPLIYPGQS DTASFDNCLE LLTMAGYPLA QAMMMMIPEA WEQHTLMDDN RRAFYEYHAA MMEPWDGPAA ICFTDGRQIG ATLDRNGLRP ARYYVTDDDM VVMASEAGVL PIPESRIVKK WRLQPGKMFL IDMEQGRIID DKELKDNLAN AKPYKSWIDA VRIKLDELDA KPEDVAAETK PAAKLLDRQQ AFAYTQEDVK FLMAPMAANG EEAAGSMGND SPLAVLSSKN KTLYNYFKQL FAQVTNPPID PIRENVVMSL VSFIGPKPNL LELNNINPPM RLEVSQPVLD FKDMAKIRNI EHYTGGKFMA YELDICYPVA WGKEGIEARL ASLCAEAVDA VKSGYNILIV SDRAVDEKQA AIPALLATSA IHHHLVDKGL RTSTGLVVET GSAREVHHFA LLAGYGAEAV HPYLAMETLA ELAPGLGLTA EKAIYNFTKA IGKGLHKVMS KMGISTYMSY TGAQIFEAIG LSRELVDKYF QGTASNVGGI GIFEVAEEAL RLHRDAFGDA PVLANMLDAG GEYAYRVRGE EHMWTPDSIA KLQHATRANS YQTYKEYANL INDQSKRHMT LRGLFEFKVD PARAIPLEEV EPAKEIVKRF ATGAMSLGSI STEAHTTLAV AMNRIGGKSN TGEGGEDERR YRNELRGIPI KQGTKLSDVI GREVVERDLE LQEGDSLRSK IKQVASGRFG VTAEYLASAD QIQIKMAQGA KPGEGGQLPG HKVTDYIGKL RYAVPGVGLI SPPPHHDIYS IEDLAQLIHD LKNVNPRSDV SVKLVSEVGV GTVAAGVAKA KADHVVIAGH DGGTGASPWS SIKHAGTPWE LGLAETQQTL MLNGLRNRIR VQADGQMKTG RDVVIGALLG ADEFGFATAP LVVEGCIMMR KCHLNTCPVG VATQDPVLRK KFSGKPEHVV NYFFFVAEEV REIMAQLGIR TFNELIGRAD LLDTKSGIEH WKARGLDFAR IFYQPAKKEG EPCYQVDVQD HGLDRALDHQ LIEKSKAALE KGERVSFIQP VRNVNRTVGA MLSGEVAKRY GHEGLPDDSI HVQMQGTAGQ SFGAFLAHGI TLDLVGDGND YVGKGLSGGR VIVRPPHEFR GEPTNNIIVG NTVLYGALAG EAFFNGVAGE RFAVRNSGAT TVVEGTGDHG CEYMTGGTVV VLGATGRNFA AGMSGGVAYV YDEDGLFDKR CNTAQVALES VLSAADQEKA HTPSTWHKVN GERVLDEQLL KALVEKHFRY TGSERAKELL ADWNNARRRF VKVFPTEYKR ALAEMYEREQ EAGREQIAA
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